RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ABCB4P21439 1286 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 SYT1P21579 422 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 PRKCHP24723 683 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 GUCY1B3Q02153 619 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 GRIN1Q05586 938 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 BNIP3Q12983 259 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 TMEM132DQ14C87 1099 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 IGF2-ASQ6U949 168 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 NUDT18Q6ZVK8 323 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 DDX42Q86XP3 938 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS25-204ENST00000589577 DIS3L2Q8IYB7 885 aaKnown RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 LSMEM2Q8N112 164 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 RBBP8NLQ8NC74 664 aaPredicted RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 SCFD1Q8WVM8 642 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 PRCCQ92733 491 aaPredicted RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 PRR11Q96HE9 360 aaPredicted RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 FUBP3Q96I24 572 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS25-204ENST00000589577 SLC6A18Q96N87 628 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 ZNF396Q96N95 335 aaPredicted RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 TSPAN18Q96SJ8 248 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 MMS19Q96T76 1030 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 FOXP1Q9H334 677 aaPredicted RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 EBF2Q9HAK2 575 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 THSD1Q9NS62 852 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 DDX43Q9NXZ2 648 aaKnown RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 CPSF3Q9UKF6 684 aaKnown RBP6.47□□□□□ -1.37
VPS25-204ENST00000589577 APCP25054 2843 aa6.47□□□□□ -1.37
VPS25-204ENST00000589577 SCN8AQ9UQD0 1980 aa6.46□□□□□ -1.37
VPS25-204ENST00000589577 HIVEP1P15822 2718 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 CDRT15L2A8MXV6 281 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 C10orf142B7Z368 130 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 TRIM38O00635 465 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 GABRDO14764 452 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 OGTO15294 1046 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 CSO75390 466 aaKnown RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 FSBPO95073 299 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 SEMA4FO95754 770 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 ZSCAN22P10073 491 aaPredicted RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 CDC25AP30304 524 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 DGKGP49619 791 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 CACNA2D1P54289 1103 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 NOP14P78316 857 aaKnown RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 TAF10Q12962 218 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 STRN3Q13033 797 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 SRSF6Q13247 344 aaKnown RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 STARD3Q14849 445 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 GEN1Q17RS7 908 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 RILPL1Q5EBL4 403 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 SLC39A4Q6P5W5 647 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 FAM171BQ6P995 826 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 XKR5Q6UX68 686 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 DENND5BQ6ZUT9 1274 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 ADAT2Q7Z6V5 191 aaKnown RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 SPATA2LQ8IUW3 424 aaPredicted RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 CXorf38Q8TB03 319 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 MYLPFQ96A32 169 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 FAM212AQ96EL1 285 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 GBP4Q96PP9 640 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 BBS2Q9BXC9 721 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 ACE2Q9BYF1 805 aaPredicted RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 ZNF768Q9H5H4 540 aaKnown RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 LRRC4CQ9HCJ2 640 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 CRTAC1Q9NQ79 661 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 DPP3Q9NY33 737 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 MARK1Q9P0L2 795 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 THAP10Q9P2Z0 257 aaPredicted RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 FBXO10Q9UK96 956 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 SATB2Q9UPW6 733 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 DERAQ9Y315 318 aa6.46□□□□□ -1.38
VPS25-204ENST00000589577 TDRD6O60522 2096 aaKnown RBP6.46□□□□□ -1.38
VPS25-204ENST00000589577 A0A0B4J269 797 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 A0A1W2PR77 199 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 GOLGA6L4A6NEF3 574 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 E9PMD0 336 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 LZTS3O60299 673 aaPredicted RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 OPA1O60313 960 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 F13A1P00488 732 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 ABL1P00519 1130 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 IRF1P10914 325 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 ACADMP11310 421 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 FDPSP14324 419 aaKnown RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 MUTP22033 750 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 BDNFP23560 247 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 MATR3P43243 847 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS25-204ENST00000589577 PPP3CCP48454 512 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 TRAPPC10P48553 1259 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 ZNF132P52740 706 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 WNT7BP56706 349 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 C21orf59P57076 290 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 PSMC1P62191 440 aaKnown RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 RACK1P63244 317 aaKnown RBP6.45□□□□□ -1.38
VPS25-204ENST00000589577 KRT85P78386 507 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 MYL7Q01449 175 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 ZNF234Q14588 700 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 CLCA4Q14CN2 919 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 SKIDA1Q1XH10 827 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 ZSCAN23Q3MJ62 389 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 SV2CQ496J9 727 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 C3orf38Q5JPI3 329 aa6.45□□□□□ -1.38
VPS25-204ENST00000589577 FOXD4L5Q5VV16 416 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms