RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 OSER1Q9NX31 292 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 WDR35Q9P2L0 1181 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 DEC1Q9P2X7 70 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 MAST4O15021 2626 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 GTPBP10A4D1E9 387 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 NEDD8-MDP1E9PL57 170 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 TM4SF5O14894 197 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 MDM4O15151 490 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 AXIN1O15169 862 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 SART1O43290 800 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 GDF9O60383 454 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 FOXD2O60548 495 aaPredicted RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 TULP3O75386 442 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 RPP40O75818 363 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 FBXO21O94952 628 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 TBX18O95935 607 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 CYBBP04839 570 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 BRD2P25440 801 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 CORO1AP31146 461 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 CHKAP35790 457 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 TNFRSF4P43489 277 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 E2F5Q15329 346 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 MEA1Q16626 185 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 C2orf27AQ580R0 203 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 RRAGAQ7L523 313 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 ARHGEF19Q8IW93 802 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 ETFBKMTQ8IXQ9 262 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 SCML4Q8N228 414 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 TERB1Q8NA31 727 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 USP33Q8TEY7 942 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 KCTD13Q8WZ19 329 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 IRGQQ8WZA9 623 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 TRIM62Q9BVG3 475 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 BBS2Q9BXC9 721 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 FBRSL1Q9HCM7 1045 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 POLMQ9NP87 494 aaPredicted RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 ABCC13Q9NSE7 274 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 DNAJC17Q9NVM6 304 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 MARCH2Q9P0N8 246 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 NUDT5Q9UKK9 219 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 MMP17Q9ULZ9 603 aa11.1□□□□□ -0.63
CLPTM1-211ENST00000589347 PI4KAP42356 2102 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 BPTFQ12830 3046 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 TBC1D3BA6NDS4 549 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 K7EQS6 105 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 CACNG3O60359 315 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 STC2O76061 302 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 HMBSP08397 361 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 LCP1P13796 627 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 TYRP14679 529 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 ERCC5P28715 1186 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 TIE1P35590 1138 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 ACADSBP45954 432 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 PGFP49763 221 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 DGKEP52429 567 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 ZNF132P52740 706 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 ZNF445P59923 1031 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 ELF2Q15723 593 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 CNGA2Q16280 664 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 LPAL2Q16609 132 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 MAN2A1Q16706 1144 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 EXOC3L4Q17RC7 722 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 GAB4Q2WGN9 574 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 PM20D1Q6GTS8 502 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 TRIM65Q6PJ69 517 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 Q6ZNB5 142 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 CLEC17AQ6ZS10 378 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 TPGS1Q6ZTW0 290 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 CACNA2D4Q7Z3S7 1137 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 C12orf40Q86WS4 652 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 KDF1Q8NAX2 398 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 LMO3Q8TAP4 145 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 UBA3Q8TBC4 463 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 KAT5Q92993 513 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 SPACA7Q96KW9 195 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 HSFY1Q96LI6 401 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 UBE2TQ9NPD8 197 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 APEX2Q9UBZ4 518 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 ZMIZ1Q9ULJ6 1067 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 HELZ2Q9BYK8 2649 aaKnown RBP11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 SDK1Q7Z5N4 2213 aa11.09□□□□□ -0.63
CLPTM1-211ENST00000589347 ABCA7Q8IZY2 2146 aa11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 TULP2O00295 520 aa11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 ZBTB24O43167 697 aaPredicted RBP11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 RHOBTB1O94844 696 aa11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 KLF8O95600 359 aaPredicted RBP11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 LATS1O95835 1130 aa11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 TPM2P07951 284 aa11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 GNA15P30679 374 aa11.08□□□□□ -0.64
CLPTM1-211ENST00000589347 SLC6A11P48066 632 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms