RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 MBL2P11226 248 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 PCK1P35558 622 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 PGFP49763 221 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 NTHL1P78549 312 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 RING1Q06587 406 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 EFEMP1Q12805 493 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 TRIP4Q15650 581 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 NUGGCQ68CJ6 796 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 TXNDC8Q6A555 127 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 GET4Q7L5D6 327 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 DENND4AQ7Z401 1863 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 BNIPLQ7Z465 357 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 TAC4Q86UU9 113 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 CMTM8Q8IZV2 173 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 MAB21L3Q8N8X9 362 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 TPCN2Q8NHX9 752 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 FAM172AQ8WUF8 416 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 PLD4Q96BZ4 506 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 TCEAL4Q96EI5 215 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 DDIT4Q9NX09 232 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 RASAL2Q9UJF2 1139 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 CDH7Q9ULB5 785 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 ARHGAP26Q9UNA1 814 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 TFR2Q9UP52 801 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 USP15Q9Y4E8 981 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 REV3LO60673 3130 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 C2orf78A6NCI8 922 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 KIF5CO60282 957 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 CEBPBP17676 345 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 CCR1P32246 355 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 DEUP1Q05D60 604 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 PPP2R5DQ14738 602 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 ARL13BQ3SXY8 428 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 LEXMQ3ZCV2 418 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 BRMS1LQ5PSV4 323 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 TRNP1Q6NT89 227 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 OTOP3Q7RTS5 596 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 DAAM2Q86T65 1068 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 UNC45BQ8IWX7 931 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 REXO1L1PQ8IX06 675 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 NPAS3Q8IXF0 933 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 MAFAQ8NHW3 353 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 E2F7Q96AV8 911 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 TBCBQ99426 244 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 USTQ9Y2C2 406 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 DUSP10Q9Y6W6 482 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 BRWD1Q9NSI6 2320 aa17.67■□□□□ 0.42
SCAMP4-211ENST00000588907 H3BQ06 376 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 BUB1O43683 1085 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 BUB1BO60566 1050 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 APOEP02649 317 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 TCF3P15923 654 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 ATP11AP98196 1134 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 OGDHQ02218 1023 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 ZNF252P-AS1Q0IIN9 211 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 MESDQ14696 234 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 HADHQ16836 314 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 CDO1Q16878 200 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 MIB1Q86YT6 1006 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 ARL14EPQ8N8R7 260 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 ITFG1Q8TB96 612 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 FGF13Q92913 245 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 ACSF2Q96CM8 615 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 SLC46A2Q9BY10 475 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 TRIM7Q9C029 511 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 DCLK3Q9C098 648 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.66■□□□□ 0.426e-7■■■■□ 26.5
SCAMP4-211ENST00000588907 TRMT1Q9NXH9 659 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 SLC12A6Q9UHW9 1150 aa17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 NUP210Q8TEM1 1887 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-211ENST00000588907 DOCK6Q96HP0 2047 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 SLC12A8A0AV02 714 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 SPOPO43791 374 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 PRPSAP2O60256 369 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 LATS1O95835 1130 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 TBX18O95935 607 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 IGLV3-27P01718 113 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 GJA1P17302 382 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 HARS2P49590 506 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 CXCR3P49682 368 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 HDAC4P56524 1084 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 TBX4P57082 545 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 NME3Q13232 169 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 EIF4EBP2Q13542 120 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 CLUL1Q15846 466 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 AAK1Q2M2I8 961 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 C15orf59Q2T9L4 293 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 ZSCAN30Q86W11 494 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 PSTKQ8IV42 348 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 SMARCD2Q92925 531 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 RNF34Q969K3 372 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 KLF16Q9BXK1 252 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 RNF38Q9H0F5 515 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 WDCPQ9H6R7 721 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 TRPV4Q9HBA0 871 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 TDP1Q9NUW8 608 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 OBP2AQ9NY56 170 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 TRIM10Q9UDY6 481 aa17.65■□□□□ 0.42
SCAMP4-211ENST00000588907 SFMBT1Q9UHJ3 866 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms