RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 ARHGAP26Q9UNA1 814 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 PCDHA13Q9Y5I0 950 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 HEPACAM2A8MVW5 462 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 SCAMP3O14828 347 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 TRUB2O95900 331 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 IGLV3-25P01717 112 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 ASGR2P07307 311 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 TMEM253P0C7T8 217 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 IRF1P10914 325 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 ATXN1P54253 815 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 EIF4EBP2Q13542 120 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 HTR4Q13639 388 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 SPA17Q15506 151 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 ZNF77Q15935 545 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 CCDC14Q49A88 953 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 SH3PXD2AQ5TCZ1 1133 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 VITQ6UXI7 678 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 ARCQ7LC44 396 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 CELF5Q8N6W0 485 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 SH3RF2Q8TEC5 729 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 NT5C3BQ969T7 300 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 ZNF830Q96NB3 372 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 NECAB3Q96P71 396 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 PPP1R9BQ96SB3 815 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 TBCBQ99426 244 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 NPY6RQ99463 290 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 DESI2Q9BSY9 194 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 TRIM62Q9BVG3 475 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 KCNF1Q9H3M0 494 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 SMOC2Q9H3U7 446 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 KCNK12Q9HB15 430 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 ZFP14Q9HCL3 533 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 NUMBLQ9Y6R0 609 aa11.17□□□□□ -0.62
SMARCA4-213ENST00000587988 MYO10Q9HD67 2058 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 SYNJ2BP-COX16A0A087WUM0 186 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 A0A0U1RQJ8 604 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 TMEM191CA6NGB0 347 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 M0QYT0 321 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 DPYSL4O14531 572 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 IRAK2O43187 625 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 GREM1O60565 184 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 ECI2O75521 394 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 STC2O76061 302 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 PTMAP06454 111 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 TCF3P15923 654 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 GPD1P21695 349 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 SULT1E1P49888 294 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 ATP11AP98196 1134 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 ZNF252P-AS1Q0IIN9 211 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 USP4Q13107 963 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 GRM2Q14416 872 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 SLC25A52Q3SY17 297 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 C10orf76Q5T2E6 689 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 DCUN1D2Q6PH85 259 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 MTSS1LQ765P7 747 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 BNIPLQ7Z465 357 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 BPIFB1Q8TDL5 484 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 CTNNBL1Q8WYA6 563 aaPredicted RBP11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 ELSPBP1Q96BH3 223 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 BTBD6Q96KE9 485 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 NUP85Q9BW27 656 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 CD320Q9NPF0 282 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 OSGEPQ9NPF4 335 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 OBP2AQ9NY56 170 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 COX16Q9P0S2 106 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 CFAP97Q9P2B7 532 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 INTUQ9ULD6 942 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
SMARCA4-213ENST00000587988 ARHGAP6O43182 974 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 CCP110O43303 1012 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 IGLV3-27P01718 113 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 KLKB1P03952 638 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 SDC4P31431 198 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 PTPN9P43378 593 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 TBX4P57082 545 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 COG7P83436 770 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 NME3Q13232 169 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 TRIP4Q15650 581 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 CDO1Q16878 200 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 ZC3H12AQ5D1E8 599 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 SLC44A3Q8N4M1 653 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 SLC35G2Q8TBE7 412 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 ZNF564Q8TBZ8 553 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 CENPIQ92674 756 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 ASIC4Q96FT7 647 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 SLC39A13Q96H72 371 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 ZFYVE19Q96K21 471 aa11.15□□□□□ -0.62
SMARCA4-213ENST00000587988 FCRL2Q96LA5 508 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms