RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 MSI1O43347 362 aaKnown RBP16.86■□□□□ 0.29
CXXC1-209ENST00000587342 PENKP01210 267 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-209ENST00000587342 CISD3P0C7P0 127 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 SLC9A1P19634 815 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 CCDC6Q16204 474 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 FYB2Q5VWT5 728 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 BSPRYQ5W0U4 402 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 EGFLAMQ63HQ2 1017 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 GRAMD4Q6IC98 578 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 DENND1BQ6P3S1 775 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 DENND1CQ8IV53 801 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 FMNL3Q8IVF7 1028 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 SIX6OS1Q8N1H7 587 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 SCML4Q8N228 414 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 IPO9Q96P70 1041 aaKnown RBP16.86■□□□□ 0.29
CXXC1-209ENST00000587342 ACOX2Q99424 681 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 SIX2Q9NPC8 291 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-209ENST00000587342 SFMBT1Q9UHJ3 866 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 CYTH4Q9UIA0 394 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 CLEC4EQ9ULY5 219 aa16.86■□□□□ 0.29
CXXC1-209ENST00000587342 NCOR2Q9Y618 2525 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 FGFR1OPO95684 399 aaKnown RBP16.85■□□□□ 0.29
CXXC1-209ENST00000587342 KRT5P13647 590 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 BCKDHBP21953 392 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 COG7P83436 770 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 TRIP4Q15650 581 aaPredicted RBP16.85■□□□□ 0.29
CXXC1-209ENST00000587342 RSPO4Q2I0M5 234 aaPredicted RBP16.85■□□□□ 0.29
CXXC1-209ENST00000587342 PLK5Q496M5 336 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 CACNA2D4Q7Z3S7 1137 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 FAM217AQ8IXS0 508 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 CCDC26Q8TAB7 109 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 NUP62CLQ9H1M0 184 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 DUSP15Q9H1R2 295 aaPredicted RBP16.85■□□□□ 0.29
CXXC1-209ENST00000587342 CD248Q9HCU0 757 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 CNGB3Q9NQW8 809 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 SEMA4GQ9NTN9 838 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 DLL3Q9NYJ7 618 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 WDR35Q9P2L0 1181 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 FBXO10Q9UK96 956 aa16.85■□□□□ 0.29
CXXC1-209ENST00000587342 MYO18AQ92614 2054 aaKnown RBP16.84■□□□□ 0.29
CXXC1-209ENST00000587342 GFRA2O00451 464 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 EPN2O95208 641 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 FYNP06241 537 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 WASP42768 502 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 GPD2P43304 727 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 RPL34P49207 117 aaKnown RBP16.84■□□□□ 0.29
CXXC1-209ENST00000587342 DGKEP52429 567 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 HSP90AA4PQ58FG1 418 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 MIIPQ5JXC2 388 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 DPY19L2P1Q6NXN4 242 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 MSANTD2Q6P1R3 559 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 CREBRFQ8IUR6 639 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 FRMD1Q8N878 549 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 ZNF513Q8N8E2 541 aaPredicted RBP16.84■□□□□ 0.29
CXXC1-209ENST00000587342 OLIG1Q8TAK6 271 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 PLD4Q96BZ4 506 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 ERLEC1Q96DZ1 483 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 ZC3H10Q96K80 434 aaKnown RBP16.84■□□□□ 0.29
CXXC1-209ENST00000587342 SMOC1Q9H4F8 434 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 STRIP2Q9ULQ0 834 aa16.84■□□□□ 0.29
CXXC1-209ENST00000587342 A0A1W2PQF6 199 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 PNMA6AP0CW24 399 aaPredicted RBP16.83■□□□□ 0.28
CXXC1-209ENST00000587342 PON1P27169 355 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 DGKGP49619 791 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 MFAP3P55082 362 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 STILQ15468 1287 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 HSF5Q4G112 596 aaPredicted RBP16.83■□□□□ 0.28
CXXC1-209ENST00000587342 PRR23CQ6ZRP0 262 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 GPT2Q8TD30 523 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 SHC3Q92529 594 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
CXXC1-209ENST00000587342 MIS12Q9H081 205 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 ARRDC1-AS1Q9H2J1 176 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 THAP9Q9H5L6 903 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 APEX2Q9UBZ4 518 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 TJP2Q9UDY2 1190 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 STARD13Q9Y3M8 1113 aa16.83■□□□□ 0.28
CXXC1-209ENST00000587342 TCRBV21S2A2A0A5A6 115 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
CXXC1-209ENST00000587342 GDF9O60383 454 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 LRP3O75074 770 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 LETM1O95202 739 aaPredicted RBP16.82■□□□□ 0.28
CXXC1-209ENST00000587342 IGLV3-27P01718 113 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 LTFP02788 710 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 MTIF2P46199 727 aaKnown RBP16.82■□□□□ 0.28
CXXC1-209ENST00000587342 SGSHP51688 502 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 LMNB2Q03252 620 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 SF3A2Q15428 464 aaKnown RBP16.82■□□□□ 0.28
CXXC1-209ENST00000587342 CSRP2Q16527 193 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 ARHGAP44Q17R89 818 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 GEN1Q17RS7 908 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 EOGTQ5NDL2 527 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 KIAA1211LQ6NV74 962 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 GBP6Q6ZN66 633 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 CPXM2Q8N436 756 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 GPR161Q8N6U8 529 aaKnown RBP16.82■□□□□ 0.28
CXXC1-209ENST00000587342 RNF139Q8WU17 664 aa16.82■□□□□ 0.28
CXXC1-209ENST00000587342 HMGB4Q8WW32 186 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms