RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ARMCX6Q7L4S7 300 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 OSTM1Q86WC4 334 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 METTL23Q86XA0 190 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 CBWD2Q8IUF1 395 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 WDR49Q8IV35 697 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 BRSK2Q8IWQ3 736 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 SYNPOQ8N3V7 929 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 PDCL2Q8N4E4 241 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 CCDC33Q8N5R6 958 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 ARL14EPQ8N8R7 260 aaPredicted RBP8.26□□□□□ -1.09
VMP1-204ENST00000587259 RDH13Q8NBN7 331 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 RLN3Q8WXF3 142 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 SAAL1Q96ER3 474 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 FAXDC2Q96IV6 333 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 ZC3H10Q96K80 434 aaKnown RBP8.26□□□□□ -1.09
VMP1-204ENST00000587259 FAM213AQ9BRX8 229 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 OXCT2Q9BYC2 517 aaPredicted RBP8.26□□□□□ -1.09
VMP1-204ENST00000587259 ECT2Q9H8V3 914 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 SIX2Q9NPC8 291 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 VPS45Q9NRW7 570 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 RBAKQ9NYW8 714 aaPredicted RBP8.26□□□□□ -1.09
VMP1-204ENST00000587259 DNAJC12Q9UKB3 198 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 L1RE1Q9UN81 338 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 PCDHA13Q9Y5I0 950 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 ATXN2Q99700 1313 aaKnown RBP8.26□□□□□ -1.09
VMP1-204ENST00000587259 OBSL1O75147 1896 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 BAHCC1Q9P281 2608 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 BCLAF3A2AJT9 711 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 GOLGA8IPA6NC78 632 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 GOLGA8JA6NMD2 632 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 LRRIQ3A6PVS8 624 aaPredicted RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 KPNA7A9QM74 516 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 SMAPO00193 183 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 CDX4O14627 284 aaPredicted RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 CTIFO43310 598 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 XPOTO43592 962 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 ATP2C2O75185 946 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 URI1O94763 535 aaPredicted RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 IL18RAPO95256 599 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 PROS1P07225 676 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 TNNI1P19237 187 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 WEE1P30291 646 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 POLR2BP30876 1174 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 GCLMP48507 274 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 BPIFB4P59827 614 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 IRX4P78413 519 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 CKAP4Q07065 602 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 PPP3CAQ08209 521 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 ZNF77Q15935 545 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 ASTE1Q2TB18 679 aaPredicted RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 LMBRD2Q68DH5 695 aaPredicted RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 ANO7Q6IWH7 933 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 CC2D1AQ6P1N0 951 aaPredicted RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 UNQ6494/PRO21346Q6UXR6 183 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 MTERF4Q7Z6M4 381 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 MON1AQ86VX9 555 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 NT5DC4Q86YG4 428 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 SCN4BQ8IWT1 228 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 THEM5Q8N1Q8 247 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 DEFB119Q8N690 84 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 CEP112Q8N8E3 955 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 MNS1Q8NEH6 495 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 DEFB124Q8NES8 71 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 SPPL2BQ8TCT7 592 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 SH3RF2Q8TEC5 729 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 DDX1Q92499 740 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 MRPS31Q92665 395 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 CD101Q93033 1021 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 CCDC127Q96BQ5 260 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 LOXL4Q96JB6 756 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 NOX5Q96PH1 765 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 CGRRF1Q99675 332 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.25□□□□□ -1.09
VMP1-204ENST00000587259 FAM124BQ9H5Z6 455 aaPredicted RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 RAB20Q9NX57 234 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 DUS2Q9NX74 493 aaKnown RBP8.25□□□□□ -1.09
VMP1-204ENST00000587259 GTF3C4Q9UKN8 822 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 GUCA1BQ9UMX6 200 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 WASF3Q9UPY6 502 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 PCDHB5Q9Y5E4 795 aa8.25□□□□□ -1.09
VMP1-204ENST00000587259 ZNF638Q14966 1978 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 ATRXP46100 2492 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 MYO16Q9Y6X6 1858 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 A0A0A6YYK5 440 aaPredicted RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 EFCAB8A8MWE9 144 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 K7EQS6 105 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 ATG13O75143 517 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 APBB3O95704 486 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 ITGB3P05106 788 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 CKMP06732 381 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 DLATP10515 647 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 OPRD1P41143 372 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 ARHGAP25P42331 645 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 PIK3CAP42336 1068 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 MAPK8P45983 427 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 SLC6A11P48066 632 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 DHPSP49366 369 aaPredicted RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 PDE6CP51160 858 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms