RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 FAM204AQ9H8W3 233 aa14.72□□□□□ -0.05
TPM4-205ENST00000586833 SPHK2Q9NRA0 654 aa14.72□□□□□ -0.05
TPM4-205ENST00000586833 AIPL1Q9NZN9 384 aa14.72□□□□□ -0.05
TPM4-205ENST00000586833 CYTH4Q9UIA0 394 aa14.72□□□□□ -0.05
TPM4-205ENST00000586833 NDRG2Q9UN36 371 aaKnown RBP14.72□□□□□ -0.05
TPM4-205ENST00000586833 LUC7L2Q9Y383 392 aaKnown RBP14.72□□□□□ -0.05
TPM4-205ENST00000586833 TYW5A2RUC4 315 aaKnown RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 ANKRD62A6NC57 917 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 PDGFBP01127 241 aaPredicted RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 ERBB2P04626 1255 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 CYP1A1P04798 512 aaPredicted RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 GJA4P35212 333 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 EIF2DP41214 584 aaKnown RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 RPS9P46781 194 aaKnown RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 TBX4P57082 545 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 ZXDBP98169 803 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 FMO1Q01740 532 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 E2F5Q15329 346 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 ANO4Q32M45 955 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 DCAF6Q58WW2 860 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 FAM102AQ5T9C2 384 aaPredicted RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 CWF19L1Q69YN2 538 aaKnown RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 SPECC1LQ69YQ0 1117 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 FAM183BPQ6ZVS7 135 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 SLC26A9Q7LBE3 791 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 BBS7Q8IWZ6 715 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 ZNF557Q8N988 423 aaPredicted RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 RIN3Q8TB24 985 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 DQX1Q8TE96 717 aaKnown RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 CLEC4CQ8WTT0 213 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 SLC20A1Q8WUM9 679 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 CPA5Q8WXQ8 436 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 BAP1Q92560 729 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 RNF34Q969K3 372 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 IRX2Q9BZI1 471 aaPredicted RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 FOXQ1Q9C009 403 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 LINC00597Q9H2U6 94 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 ZNHIT6Q9NWK9 470 aaKnown RBP14.71□□□□□ -0.05
TPM4-205ENST00000586833 SFMBT1Q9UHJ3 866 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 CAPN11Q9UMQ6 739 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 TLR6Q9Y2C9 796 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 NOTCH4Q99466 2003 aa14.71□□□□□ -0.05
TPM4-205ENST00000586833 TRDMT1O14717 391 aaKnown RBP14.7□□□□□ -0.06
TPM4-205ENST00000586833 HOXC11O43248 304 aaPredicted RBP14.7□□□□□ -0.06
TPM4-205ENST00000586833 ATG13O75143 517 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 DAB1O75553 588 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 CYP17A1P05093 508 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 TARSP26639 723 aaKnown RBP14.7□□□□□ -0.06
TPM4-205ENST00000586833 NOS2P35228 1153 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 PBX1P40424 430 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 PRKCIP41743 596 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 SOX9P48436 509 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 CLEC16AQ2KHT3 1053 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 TDRD12Q587J7 1177 aaKnown RBP14.7□□□□□ -0.06
TPM4-205ENST00000586833 OLFML1Q6UWY5 402 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 DENND1CQ8IV53 801 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 CCDC117Q8IWD4 279 aaPredicted RBP14.7□□□□□ -0.06
TPM4-205ENST00000586833 DEFB106AQ8N104 65 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 AZIN2Q96A70 460 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 SLC2A13Q96QE2 648 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 LMAN1LQ9HAT1 526 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.7□□□□□ -0.061e-7■■■■■ 26.8
TPM4-205ENST00000586833 ADAM22Q9P0K1 906 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 NAALADL1Q9UQQ1 740 aa14.7□□□□□ -0.06
TPM4-205ENST00000586833 BDP1A6H8Y1 2624 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 PTPRDP23468 1912 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 GABBR2O75899 941 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 TRUB2O95900 331 aaKnown RBP14.69□□□□□ -0.06
TPM4-205ENST00000586833 F9P00740 461 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 APODP05090 189 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 ABCB4P21439 1286 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 CD72P21854 359 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 MMP8P22894 467 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 MATKP42679 507 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 CENPCQ03188 943 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 PON2Q15165 354 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 LY6G5CQ5SRR4 150 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 ACBD5Q5T8D3 534 aaPredicted RBP14.69□□□□□ -0.06
TPM4-205ENST00000586833 SARM1Q6SZW1 724 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 Q6ZNB5 142 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 ARCQ7LC44 396 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 IRF2BP2Q7Z5L9 587 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 XYLT1Q86Y38 959 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 PHF13Q86YI8 300 aaPredicted RBP14.69□□□□□ -0.06
TPM4-205ENST00000586833 CCDC105Q8IYK2 499 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 CPXM2Q8N436 756 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 ATP6V0D2Q8N8Y2 350 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 CPLX3Q8WVH0 158 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 TRIM11Q96F44 468 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 PNKPQ96T60 521 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 SELENOOQ9BVL4 669 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 BBS2Q9BXC9 721 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 TRIM5Q9C035 493 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 TTYH3Q9C0H2 523 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.69□□□□□ -0.067e-12■■■■■ 49
TPM4-205ENST00000586833 MARK1Q9P0L2 795 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 DEC1Q9P2X7 70 aa14.69□□□□□ -0.06
TPM4-205ENST00000586833 AGO1Q9UL18 857 aaKnown RBP14.69□□□□□ -0.06
TPM4-205ENST00000586833 GOLGA8SH3BPF8 625 aa14.68□□□□□ -0.06
TPM4-205ENST00000586833 SCAMP3O14828 347 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms