RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 MFAP3P55082 362 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 INCA1Q0VD86 236 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 STK4Q13043 487 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 HNRNPDQ14103 355 aaKnown RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 FYB2Q5VWT5 728 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 C19orf48Q6RUI8 117 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 GLRX5Q86SX6 157 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 UNC93AQ86WB7 457 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 RGL4Q8IZJ4 473 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 BAHD1Q8TBE0 780 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 TMEM174Q8WUU8 243 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 ITM2CQ9NQX7 267 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.414e-6■■■■■ 85.3
BRCA1-225ENST00000586385 TOR4AQ9NXH8 423 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 THAP10Q9P2Z0 257 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 PCOLCE2Q9UKZ9 415 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
BRCA1-225ENST00000586385 NBEAQ8NFP9 2946 aa12.52□□□□□ -0.41
BRCA1-225ENST00000586385 APC2O95996 2303 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 CEP192Q8TEP8 1941 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-225ENST00000586385 NDUFS2O75306 463 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 YEATS4O95619 227 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 NCAM1P13591 858 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 AFMP43652 599 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 COPAP53621 1224 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 SGSM1Q2NKQ1 1148 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 SOWAHCQ53LP3 525 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-225ENST00000586385 C10orf120Q5SQS8 335 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 TMEM215Q68D42 235 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 MARCH9Q86YJ5 346 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 ZCCHC9Q8N567 271 aaKnown RBP12.51□□□□□ -0.41
BRCA1-225ENST00000586385 SORCS1Q8WY21 1168 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 FOXJ1Q92949 421 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 GPR174Q9BXC1 333 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 BACH2Q9BYV9 841 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 MAGEF1Q9HAY2 307 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 PRDM16Q9HAZ2 1276 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 DNMT3LQ9UJW3 386 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
BRCA1-225ENST00000586385 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
BRCA1-225ENST00000586385 A0A1B0GTW7 788 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 METTL12A8MUP2 240 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 DKK1O94907 266 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 IGLV3-19P01714 112 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 HLA-DRAP01903 254 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
BRCA1-225ENST00000586385 PRKCHP24723 683 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 TPMTP51580 245 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 WDR45BQ5MNZ6 344 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 SYCP2LQ5T4T6 812 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 DBX2Q6ZNG2 339 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 ZNF276Q8N554 614 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 MDM1Q8TC05 714 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 TMC2Q8TDI7 906 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 ZDHHC5Q9C0B5 715 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 PNPLA8Q9NP80 782 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 PCDHA5Q9Y5H7 936 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 PLXNB3Q9ULL4 1909 aa12.5□□□□□ -0.41
BRCA1-225ENST00000586385 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-225ENST00000586385 ACTN4O43707 911 aaKnown RBP12.49□□□□□ -0.41
BRCA1-225ENST00000586385 CILPO75339 1184 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 NR3C1P04150 777 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
BRCA1-225ENST00000586385 GNSP15586 552 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
BRCA1-225ENST00000586385 PPP3CAQ08209 521 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 ZNF234Q14588 700 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 DCAF12L1Q5VU92 463 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 RESP18Q5W5W9 173 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 PDZD3Q86UT5 571 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 TMPRSS6Q8IU80 811 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 CADM4Q8NFZ8 388 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 GOLGA5Q8TBA6 731 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 TAF4BQ92750 862 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 BBC3Q96PG8 261 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-225ENST00000586385 SERTAD1Q9UHV2 236 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 AGO1Q9UL18 857 aaKnown RBP12.49□□□□□ -0.41
BRCA1-225ENST00000586385 PCDHA7Q9UN72 937 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 BTBD3Q9Y2F9 522 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 LAMA5O15230 3695 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 LOC400499M0QZD8 3231 aa12.49□□□□□ -0.41
BRCA1-225ENST00000586385 MEI4A8MW99 385 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 IKBKBO14920 756 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 BCAT2O15382 392 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 CLSTN1O94985 981 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms