RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 WDR6Q9NNW5 1121 aaKnown RBP13.47□□□□□ -0.25
TRIM47-202ENST00000585333 NAALADL1Q9UQQ1 740 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 ALG6Q9Y672 507 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 DUSP10Q9Y6W6 482 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 GREB1Q4ZG55 1949 aa13.47□□□□□ -0.25
TRIM47-202ENST00000585333 A0A1W2PRU2 124 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 GRID2IPA4D2P6 1211 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 TMEM110-MUSTN1A8MSY1 372 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 MDM4O15151 490 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 ZNF500O60304 480 aaPredicted RBP13.46□□□□□ -0.25
TRIM47-202ENST00000585333 GLP2RO95838 553 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 OLFM2O95897 454 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 IGLV3-25P01717 112 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 MBL2P11226 248 aaPredicted RBP13.46□□□□□ -0.25
TRIM47-202ENST00000585333 TBX4P57082 545 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 SLC7A9P82251 487 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 EFEMP1Q12805 493 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 NME3Q13232 169 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 TUBB2AQ13885 445 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 ADGRE1Q14246 886 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 RPS6KA1Q15418 735 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 CDO1Q16878 200 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 PUS10Q3MIT2 529 aaKnown RBP13.46□□□□□ -0.25
TRIM47-202ENST00000585333 EFHC2Q5JST6 749 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 CC2D1AQ6P1N0 951 aaPredicted RBP13.46□□□□□ -0.25
TRIM47-202ENST00000585333 EP400NLQ6ZTU2 488 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 HFE2Q6ZVN8 426 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 GAREM2Q75VX8 874 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 AZIN2Q96A70 460 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 RBM41Q96IZ5 413 aaKnown RBP13.46□□□□□ -0.25
TRIM47-202ENST00000585333 CDX2Q99626 313 aaPredicted RBP13.46□□□□□ -0.25
TRIM47-202ENST00000585333 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 WDCPQ9H6R7 721 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
TRIM47-202ENST00000585333 TRIM10Q9UDY6 481 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 CD207Q9UJ71 328 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 RASAL2Q9UJF2 1139 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 USP18Q9UMW8 372 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 CAPN6Q9Y6Q1 641 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 MYO9BQ13459 2157 aa13.46□□□□□ -0.25
TRIM47-202ENST00000585333 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
TRIM47-202ENST00000585333 COCHO43405 550 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 LRCH4O75427 683 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 FYNP06241 537 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 TCF3P15923 654 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 COMTP21964 271 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 CTNNA2P26232 953 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 CASQ1P31415 396 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 CTNNA1P35221 906 aaKnown RBP13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SLC11A2P49281 568 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 CXCR3P49682 368 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 RWDD2BP57060 319 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SCAPQ12770 1279 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 PDK2Q15119 407 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 PRSS36Q5K4E3 855 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 ZFYVE27Q5T4F4 411 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SYCE2Q6PIF2 218 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 BNIPLQ7Z465 357 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 TAC4Q86UU9 113 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 NT5DC3Q86UY8 548 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SHKBP1Q8TBC3 707 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 NDRG1Q92597 394 aaKnown RBP13.45□□□□□ -0.26
TRIM47-202ENST00000585333 BTN2A3PQ96KV6 586 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 FAM161BQ96MY7 647 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 HAPLN3Q96S86 360 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
TRIM47-202ENST00000585333 RETREG1Q9H6L5 497 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 OBP2AQ9NY56 170 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SALL4Q9UJQ4 1053 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 ARHGAP26Q9UNA1 814 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 TFR2Q9UP52 801 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 ZNF638Q14966 1978 aaKnown RBP13.45□□□□□ -0.26
TRIM47-202ENST00000585333 ATG2AQ2TAZ0 1938 aa13.45□□□□□ -0.26
TRIM47-202ENST00000585333 SLC12A8A0AV02 714 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 FAM170AA1A519 330 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 TYW5A2RUC4 315 aaKnown RBP13.44□□□□□ -0.26
TRIM47-202ENST00000585333 USP27XA6NNY8 438 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 ZNF487B1APH4 448 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 CES2O00748 559 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 TADA3O75528 432 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 GJB6O95452 261 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 TCP1P17987 556 aaKnown RBP13.44□□□□□ -0.26
TRIM47-202ENST00000585333 MIPP30301 263 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRIM47-202ENST00000585333 HDAC4P56524 1084 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 COPS2P61201 443 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 SKIV2LQ15477 1246 aaKnown RBP13.44□□□□□ -0.26
TRIM47-202ENST00000585333 ERMARDQ5T6L9 678 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 MEI1Q5TIA1 1274 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 NYAP1Q6ZVC0 841 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 OTOP3Q7RTS5 596 aa13.44□□□□□ -0.26
TRIM47-202ENST00000585333 TMEM150AQ86TG1 271 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms