RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 STILQ15468 1287 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 LRRC74BQ6ZQY2 392 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 NRDE2Q9H7Z3 1164 aa14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ZNF395Q9H8N7 513 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-237ENST00000585163 H3BRJ5 948 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 GCATO75600 419 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 BPGMP07738 259 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TPSB2P20231 275 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 RBP5P82980 135 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SLC6A3Q01959 620 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TPSAB1Q15661 275 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 GOLGA7BQ2TAP0 167 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PKDCCQ504Y2 493 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CDKL3Q8IVW4 592 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 NDUFAF2Q8N183 169 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PDCD7Q8N8D1 485 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 LRRN4Q8WUT4 740 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SCG3Q8WXD2 468 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TRIM56Q9BRZ2 755 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 C20orf27Q9GZN8 174 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 RNPEPQ9H4A4 650 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PCMTD2Q9NV79 361 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PPARGC1AQ9UBK2 798 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 LRCH1Q9Y2L9 728 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 C2CD2Q9Y426 696 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 MAD1L1Q9Y6D9 718 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 BRCA1P38398 1863 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CCDC195A0A1B0GUA6 201 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 F8W8V4 182 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ATP5BP06576 529 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ENO1P06733 434 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CPA2P48052 419 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SERPINB9P50453 376 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 AQP5P55064 265 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 HDAC4P56524 1084 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 GRIK3Q13003 919 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 LBRQ14739 615 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PPP6R3Q5H9R7 873 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PPP1R26Q5T8A7 1209 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 MROH9Q5TGP6 573 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TMEM110Q86TL2 294 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 IFNLR1Q8IU57 520 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CRLF3Q8IUI8 442 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 MPP5Q8N3R9 675 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 AFG1LQ8WV93 481 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 COPS5Q92905 334 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CPB2Q96IY4 423 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SLC4A5Q9BY07 1137 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 DPP3Q9NY33 737 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ZNF212Q9UDV6 495 aa14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-237ENST00000585163 A0A087WZ62 844 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CCDC189A1A4V9 331 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ARF4P18085 180 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CYP2F1P24903 491 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 THOC5Q13769 683 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 KYAT1Q16773 422 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TIFABQ6ZNK6 161 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CYS1Q717R9 158 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TTC30AQ86WT1 665 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 FBXO16Q8IX29 292 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SCUBE3Q8IX30 993 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 RBM15BQ8NDT2 890 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 STKLD1Q8NE28 680 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 FBXO27Q8NI29 283 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 DTX3LQ8TDB6 740 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 FDXACB1Q9BRP7 624 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 MOCS1Q9NZB8 636 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 HBS1LQ9Y450 684 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PCDHA11Q9Y5I1 949 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 UTRNP46939 3433 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TOMM70O94826 608 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SKIP12755 728 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CCNHP51946 323 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 GBE1Q04446 702 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 AP1B1Q10567 949 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SLC10A2Q12908 348 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TBCCQ15814 346 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 DPYSL2Q16555 572 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 IRGCQ6NXR0 463 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ARCQ7LC44 396 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ADGRF2Q8IZF7 708 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SLC35F5Q8WV83 523 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 FAM161BQ96MY7 647 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CCDC106Q9BWC9 280 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 XAB2Q9HCS7 855 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 ERAP1Q9NZ08 941 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 MARCOQ9UEW3 520 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 TAGLN3Q9UI15 199 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PLA2G4CQ9UP65 541 aa14.68□□□□□ -0.06
CDK5RAP3-237ENST00000585163 LTBP3Q9NS15 1303 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 PAPSS1O43252 624 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 CNMDO75829 334 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 KITP10721 976 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 DESP17661 470 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 AMPD1P23109 780 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 NR2C2P49116 596 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 IGBP1P78318 339 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 WASHC5Q12768 1159 aa14.67□□□□□ -0.06
CDK5RAP3-237ENST00000585163 SESTD1Q86VW0 696 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms