RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SPATA21Q7Z572 469 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 C7orf61Q8IZ16 206 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 THEM5Q8N1Q8 247 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 TTC13Q8NBP0 860 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 SLC35F5Q8WV83 523 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 MAML1Q92585 1016 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 ACBD6Q9BR61 282 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 MED10Q9BTT4 135 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 HEMGNQ9BXL5 484 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 SSU72Q9NP77 194 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 SLC24A2Q9UI40 661 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 SMG5Q9UPR3 1016 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 COL4A6Q14031 1691 aa15.59■□□□□ 0.09
CDK5RAP3-236ENST00000584991 PTPRSQ13332 1948 aa15.58■□□□□ 0.09
CDK5RAP3-236ENST00000584991 GOLGA8SH3BPF8 625 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ATP5HO75947 161 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SETSIPP0DME0 302 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 GABRB2P47870 512 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 BNIP1Q12981 228 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PPIGQ13427 754 aaKnown RBP eCLIP15.58■□□□□ 0.088e-9■■■■□ 23.1
CDK5RAP3-236ENST00000584991 DNAJC24Q6P3W2 148 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 XYLT1Q86Y38 959 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 B3GNT5Q9BYG0 378 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 GPR62Q9BZJ7 368 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CWH43Q9H720 699 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 KLHL14Q9P2G3 628 aa15.58■□□□□ 0.08
CDK5RAP3-236ENST00000584991 E5RJQ4 531 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ALOX15BO15296 676 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 BAIAP3O94812 1187 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 EZRP15311 586 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 INTS6LQ5JSJ4 861 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SPDYAQ5MJ70 313 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PPP1R15BQ5SWA1 713 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FAM171A1Q5VUB5 890 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TMEM173Q86WV6 379 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 OR10T2Q8NGX3 314 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FNIP1Q8TF40 1166 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZNF689Q96CS4 500 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PCED1BQ96HM7 432 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TGS1Q96RS0 853 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TMEM209Q96SK2 561 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 NCAPGQ9BPX3 1015 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 DUSP16Q9BY84 665 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PCDH9Q9HC56 1237 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FGFR1OP2Q9NVK5 253 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZNF148Q9UQR1 794 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZBBXA8MT70 800 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RASA4BC9J798 803 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RASA4O43374 803 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FGBP02675 491 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TSHRP16473 764 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 VCPP55072 806 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RPL7AP62424 266 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PLCB3Q01970 1234 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FPGSQ05932 587 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TRIP13Q15645 432 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FAM171BQ6P995 826 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SPOCD1Q6ZMY3 1216 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CENPUQ71F23 418 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TRABD2AQ86V40 505 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CEP57Q86XR8 500 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SLC4A5Q9BY07 1137 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 WDR35Q9P2L0 1181 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 STARD13Q9Y3M8 1113 aa15.57■□□□□ 0.08
CDK5RAP3-236ENST00000584991 EXOC1LA0A1B0GW35 172 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SYN3O14994 580 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 BEST1O76090 585 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 OAZ2O95190 189 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 KRT7P08729 469 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SYN1P17600 705 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SSR1P43307 286 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ALDH7A1P49419 539 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TSPY1Q01534 308 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ACAP1Q15027 740 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 OASLQ15646 514 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SPOUT1Q5T280 376 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 OR6B2Q6IFH4 312 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FUT10Q6P4F1 479 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 DCUN1D2Q6PH85 259 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 LRRTM3Q86VH5 581 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 STK32AQ8WU08 396 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 BCL7CQ8WUZ0 217 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MYLPFQ96A32 169 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MCRS1Q96EZ8 462 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 B3GALT6Q96L58 329 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MCEEQ96PE7 176 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TMLHEQ9NVH6 421 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 GEMIN8Q9NWZ8 242 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 USTQ9Y2C2 406 aa15.56■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SF3B1O75533 1304 aaKnown RBP eCLIP15.55■□□□□ 0.081e-11■■■■■ 43.1
CDK5RAP3-236ENST00000584991 hCG_1818297A0A087WSY0 165 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 GABBR2O75899 941 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ATP6V1G2O95670 118 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ALADP13716 330 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 NPR3P17342 541 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ARSEP51690 589 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SLC8A3P57103 927 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PPARDQ03181 441 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MPP2Q14168 576 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SPARCL1Q14515 664 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms