RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 C1orf54Q8WWF1 131 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 RNF157Q96PX1 679 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 KCTD15Q96SI1 283 aaPredicted RBP14.55□□□□□ -0.08
UBBP4-202ENST00000584755 CALN1Q9BXU9 219 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 PLXNA4Q9HCM2 1894 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 DDIT4Q9NX09 232 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 OSER1Q9NX31 292 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 RWDD3Q9Y3V2 267 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 IRAK3Q9Y616 596 aa14.55□□□□□ -0.08
UBBP4-202ENST00000584755 APOC4-APOC2K7ER74 178 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 TEX28O15482 410 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 TTI1O43156 1089 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 IRAK2O43187 625 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 APOC2P02655 101 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 ADRA1BP35368 520 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 MMRN1Q13201 1228 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 NME3Q13232 169 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 TFDP2Q14188 446 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 KRT81Q14533 505 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 ANKRD20A8PQ5CZ79 823 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 SLC9A4Q6AI14 798 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 TCEAL8Q8IYN2 117 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 ZNF276Q8N554 614 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 EIF1ADQ8N9N8 165 aaKnown RBP14.54□□□□□ -0.08
UBBP4-202ENST00000584755 TTC13Q8NBP0 860 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 ADAM32Q8TC27 787 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 GPR152Q8TDT2 470 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 AUTS2Q8WXX7 1259 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 ATG4AQ8WYN0 398 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 NKD2Q969F2 451 aaPredicted RBP14.54□□□□□ -0.08
UBBP4-202ENST00000584755 FBXO32Q969P5 355 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 DHX35Q9H5Z1 703 aaKnown RBP14.54□□□□□ -0.08
UBBP4-202ENST00000584755 FAM204AQ9H8W3 233 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 PRDM16Q9HAZ2 1276 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 ARGLU1Q9NWB6 273 aaPredicted RBP14.54□□□□□ -0.08
UBBP4-202ENST00000584755 GMIPQ9P107 970 aa14.54□□□□□ -0.08
UBBP4-202ENST00000584755 LINC01553A4QN01 128 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 C5orf67F2Z3F1 127 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 I6L893 689 aaPredicted RBP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 LIASO43766 372 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 CST8O60676 142 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 GBP1P32455 592 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 CLCN6P51797 869 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 TAF10Q12962 218 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 SEMA3BQ13214 749 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 MTMR3Q13615 1198 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 BRMS1LQ5PSV4 323 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 SNX30Q5VWJ9 437 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 CCNI2Q6ZMN8 369 aaPredicted RBP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 SND1Q7KZF4 910 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 JAMLQ86YT9 394 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 IFT20Q8IY31 132 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 PQLC3Q8N755 202 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 ATL2Q8NHH9 583 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 PCDH19Q8TAB3 1148 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 SLC35B2Q8TB61 432 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 OVCA2Q8WZ82 227 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 DPF3Q92784 378 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 ABHD8Q96I13 439 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 MYRFLQ96LU7 910 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 UBE2OQ9C0C9 1292 aaKnown RBP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 ANLNQ9NQW6 1124 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 TLR8Q9NR97 1041 aaKnown RBP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 FEZ2Q9UHY8 353 aaPredicted RBP14.53□□□□□ -0.08
UBBP4-202ENST00000584755 YIPF1Q9Y548 306 aa14.53□□□□□ -0.08
UBBP4-202ENST00000584755 ZSCAN5CA6NGD5 496 aaPredicted RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 ZMYND10O75800 440 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 CNPP09543 421 aaKnown RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 CSH1P0DML2 217 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 CSH2P0DML3 217 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 HMGA1P17096 107 aaKnown RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 DNAJB2P25686 324 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 KCNJ1P48048 391 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 ZNF135P52742 658 aaPredicted RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 DRG2P55039 364 aaKnown RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 GUCY2DQ02846 1103 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 UBE3AQ05086 875 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 NNTQ13423 1086 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 PPP2R5DQ14738 602 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 OASLQ15646 514 aaKnown RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 ARL13BQ3SXY8 428 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 EFHC2Q5JST6 749 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 DUPD1Q68J44 220 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 LILRA6Q6PI73 481 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 SYDE1Q6ZW31 735 aaPredicted RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 RFX6Q8HWS3 928 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 CCDC105Q8IYK2 499 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 GIPC2Q8TF65 315 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 GRK7Q8WTQ7 553 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 CASP10Q92851 521 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 TRMT2BQ96GJ1 504 aaKnown RBP14.52□□□□□ -0.08
UBBP4-202ENST00000584755 SERPINB11Q96P15 392 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 CSPG4P5Q96PW8 444 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 ERP44Q9BS26 406 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 MAGEB5Q9BZ81 275 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 RAB17Q9H0T7 212 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 CYP4F11Q9HBI6 524 aa14.52□□□□□ -0.08
UBBP4-202ENST00000584755 EPB41L5Q9HCM4 733 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms