RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 DBX2Q6ZNG2 339 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 LRRC69Q6ZNQ3 347 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 STXBP4Q6ZWJ1 553 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 GPR155Q7Z3F1 870 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 RABEPKQ7Z6M1 372 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 FAM124AQ86V42 546 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 ETFBKMTQ8IXQ9 262 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 GALNT15Q8N3T1 639 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 ANKRD20A12PQ8NF67 263 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 NOC3LQ8WTT2 800 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 TRIM44Q96DX7 344 aaPredicted RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 DUSP9Q99956 384 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 NTPCRQ9BSD7 190 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.14□□□□□ -0.47
NUP85-224ENST00000583948 MSTO1Q9BUK6 570 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 XPO4Q9C0E2 1151 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 OLFML3Q9NRN5 406 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
NUP85-224ENST00000583948 LARSQ9P2J5 1176 aaKnown RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 UXTQ9UBK9 157 aaPredicted RBP12.14□□□□□ -0.47
NUP85-224ENST00000583948 USP9XQ93008 2570 aaPredicted RBP12.13□□□□□ -0.47
NUP85-224ENST00000583948 TPM3P06753 285 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 GNSP15586 552 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 TCF3P15923 654 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 BDNFP23560 247 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 LMO2P25791 158 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 CDC25BP30305 580 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 RPL10AP62906 217 aaKnown RBP12.13□□□□□ -0.47
NUP85-224ENST00000583948 TSPY1Q01534 308 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 LRRC63Q05C16 580 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 TARDBPQ13148 414 aaKnown RBP eCLIP12.13□□□□□ -0.474e-8■■■■■ 32.5
NUP85-224ENST00000583948 KCNJ12Q14500 433 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 GATAD2AQ86YP4 633 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 SPATA2LQ8IUW3 424 aaPredicted RBP12.13□□□□□ -0.47
NUP85-224ENST00000583948 FAM114A1Q8IWE2 563 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 BBS7Q8IWZ6 715 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 CHPFQ8IZ52 775 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 BHMTQ93088 406 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 MRFAP1L1Q96HT8 127 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 ZFRQ96KR1 1074 aaKnown RBP12.13□□□□□ -0.47
NUP85-224ENST00000583948 THAP9Q9H5L6 903 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 DSEQ9UL01 958 aa12.13□□□□□ -0.47
NUP85-224ENST00000583948 UBE4BO95155 1302 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 TP53BP1Q12888 1972 aaPredicted RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 A0A0B4J269 797 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 ZNF840PA6NDX5 716 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 GOLGA6L6A8MZA4 724 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 H0Y8X5 98 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 CAPN9O14815 690 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 EIF3DO15371 548 aaKnown RBP eCLIP12.12□□□□□ -0.47
NUP85-224ENST00000583948 BCAT2O15382 392 aaPredicted RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 XPOTO43592 962 aaKnown RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 MBL2P11226 248 aaPredicted RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 JUPP14923 745 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 CD6P30203 668 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 PGFP49763 221 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 TLE3Q04726 772 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 FILIP1LQ4L180 1135 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 WDR45BQ5MNZ6 344 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 ARHGAP40Q5TG30 622 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 EPM2AIP1Q7L775 607 aaPredicted RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 SPACA3Q8IXA5 215 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 TERB1Q8NA31 727 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 C1orf216Q8TAB5 229 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 SNX19Q92543 992 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 EEF2KMTQ96G04 330 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 MKRN2Q9H000 416 aaKnown RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 CRTAC1Q9NQ79 661 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 WSB2Q9NYS7 404 aaPredicted RBP12.12□□□□□ -0.47
NUP85-224ENST00000583948 SUSD2Q9UGT4 822 aa12.12□□□□□ -0.47
NUP85-224ENST00000583948 DOPEY2Q9Y3R5 2298 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 HNRNPDLO14979 420 aaKnown RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 FLRT2O43155 660 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 TNFSF14O43557 240 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 CALUO43852 315 aaPredicted RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 SLC28A2O43868 658 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 BRINP1O60477 761 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 ZNF217O75362 1048 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 WISP1O95388 367 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 ADH1CP00326 375 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 TPM2P07951 284 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 PDGFRBP09619 1106 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 MTIF2P46199 727 aaKnown RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 COPB1P53618 953 aaKnown RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 SLC7A9P82251 487 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 SMARCB1Q12824 385 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 KRT31Q15323 416 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 BMT2Q1RMZ1 405 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 FUT11Q495W5 492 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms