RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 PNPLA8Q9NP80 782 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 SLC2A4RGQ9NR83 387 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 TJP2Q9UDY2 1190 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 EFR3BQ9Y2G0 817 aa12.49□□□□□ -0.41
GGA3-217ENST00000583667 TDRD15B5MCY1 1934 aaKnown RBP12.49□□□□□ -0.41
GGA3-217ENST00000583667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 KANSL1LA0AUZ9 987 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 TMEM110-MUSTN1A8MSY1 372 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 TAF4O00268 1085 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 NRP1O14786 923 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 HCRTO43612 131 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 RETP07949 1114 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 PYGMP11217 842 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 TKTP29401 623 aaKnown RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 PTPN7P35236 360 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 RNASELQ05823 741 aaKnown RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 ELAVL2Q12926 359 aaKnown RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 ELF2Q15723 593 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 CSRP2Q16527 193 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 CYP1B1Q16678 543 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 RAB41Q5JT25 222 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 EFHC1Q5JVL4 640 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 TEX35Q5T0J7 233 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 OVOS1Q6IE37 1185 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 CCDC70Q6NSX1 233 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 FAM183BPQ6ZVS7 135 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 PHLDB2Q86SQ0 1253 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 RCOR2Q8IZ40 523 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 JOSD2Q8TAC2 188 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 CENPIQ92674 756 aaPredicted RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 MYADMQ96S97 322 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 LPIN3Q9BQK8 851 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 DDX23Q9BUQ8 820 aaKnown RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 SLITRK6Q9H5Y7 841 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 ANKZF1Q9H8Y5 726 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.48□□□□□ -0.41
GGA3-217ENST00000583667 DDX56Q9NY93 547 aaKnown RBP12.48□□□□□ -0.41
GGA3-217ENST00000583667 CACNG4Q9UBN1 327 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 IRAK3Q9Y616 596 aa12.48□□□□□ -0.41
GGA3-217ENST00000583667 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 F8VP50 259 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 GOLGA8SH3BPF8 625 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 TULP2O00295 520 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 SART1O43290 800 aaKnown RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 TADA2AO75478 443 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 FBXO21O94952 628 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 ZRANB2O95218 330 aaKnown RBP eCLIP12.47□□□□□ -0.41
GGA3-217ENST00000583667 FGGP02679 453 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 GALTP07902 379 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 KRT7P08729 469 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 GPD1P21695 349 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 FGFR3P22607 806 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 CETN2P41208 172 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 PTPN9P43378 593 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 OR1G1P47890 313 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 MARCKSL1P49006 195 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 TAS2R40P59535 323 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 YWHAHQ04917 246 aaPredicted RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 SMARCB1Q12824 385 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 BRD3Q15059 726 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 TAZQ16635 292 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 MDH1BQ5I0G3 518 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 FAM102AQ5T9C2 384 aaPredicted RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 SEL1L2Q5TEA6 688 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 IL31Q6EBC2 164 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 OR6B2Q6IFH4 312 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 CLEC20AQ6ZU45 233 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 BEND5Q7L4P6 421 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 PIGZQ86VD9 579 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 CPNE8Q86YQ8 564 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 SLC13A5Q86YT5 568 aaPredicted RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 VPS52Q8N1B4 723 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 ARFGAP1Q8N6T3 406 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 EIF1ADQ8N9N8 165 aaKnown RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 CMASQ8NFW8 434 aaPredicted RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 TSC1Q92574 1164 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 PARD6BQ9BYG5 372 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 ZBP1Q9H171 429 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 ST7Q9NRC1 585 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 METTL5Q9NRN9 209 aaKnown RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 RBM12Q9NTZ6 932 aaKnown RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 ADAM28Q9UKQ2 775 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 RAB23Q9ULC3 237 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
GGA3-217ENST00000583667 TIMM13Q9Y5L4 95 aaPredicted RBP12.47□□□□□ -0.41
GGA3-217ENST00000583667 WDFY3Q8IZQ1 3526 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 ITPR1Q14643 2758 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 CCDC151A5D8V7 595 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 OR6C75A6NL08 312 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 NT5C1B-RDH14C9J2C7 533 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 KRIT1O00522 736 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 LRCH4O75427 683 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms