RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FBXO10Q9UK96 956 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 BTBD3Q9Y2F9 522 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 FLNBO75369 2602 aaKnown RBP12.97□□□□□ -0.33
TOP3A-215ENST00000583328 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 CEP192Q8TEP8 1941 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 CLIC2O15247 247 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 BEST1O76090 585 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 ZSCAN22P10073 491 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-215ENST00000583328 PLA2G4AP47712 749 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 CYP2J2P51589 502 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 MAP3K7CLP57077 242 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 TEAD4Q15561 434 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 KIF19Q2TAC6 998 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 ACOT1Q86TX2 421 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 FAM124AQ86V42 546 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 FUKQ8N0W3 1084 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 ZMIZ2Q8NF64 920 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 PIP4K2CQ8TBX8 421 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 ZNF516Q92618 1163 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 XYLT2Q9H1B5 865 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 CYLDQ9NQC7 956 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 AGPAT3Q9NRZ7 376 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 NUDT5Q9UKK9 219 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 SLC27A6Q9Y2P4 619 aa12.96□□□□□ -0.33
TOP3A-215ENST00000583328 SMG1Q96Q15 3661 aaKnown RBP12.96□□□□□ -0.34
TOP3A-215ENST00000583328 E9PAM4 449 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 MDM4O15151 490 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 EIF3DO15371 548 aaKnown RBP eCLIP12.95□□□□□ -0.34
TOP3A-215ENST00000583328 F13A1P00488 732 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 RARGP13631 454 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 CCDC130P13994 396 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 ACO1P21399 889 aaKnown RBP12.95□□□□□ -0.34
TOP3A-215ENST00000583328 HOXD13P35453 343 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 GRK6P43250 576 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 AFF3P51826 1226 aaKnown RBP12.95□□□□□ -0.34
TOP3A-215ENST00000583328 MFAP3P55082 362 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 BIRC3Q13489 604 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 E2F5Q15329 346 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
TOP3A-215ENST00000583328 GEN1Q17RS7 908 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 ZNF699Q32M78 642 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 ZNF667Q5HYK9 610 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 DHRS13Q6UX07 377 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 CACUL1Q86Y37 369 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 XXYLT1Q8NBI6 393 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 C1orf216Q8TAB5 229 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 SLC2A14Q8TDB8 520 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 OSER1Q9NX31 292 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 DNMT3LQ9UJW3 386 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 SCML2Q9UQR0 700 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
TOP3A-215ENST00000583328 GCN1Q92616 2671 aaKnown RBP12.95□□□□□ -0.34
TOP3A-215ENST00000583328 KNL1Q8NG31 2342 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 A0A1W2PQH9 124 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 TK2O00142 265 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 KCNK3O14649 394 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 IGLV3-19P01714 112 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 EPHX1P07099 455 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 HLA-EP13747 358 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 CHKAP35790 457 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
TOP3A-215ENST00000583328 ENPP2Q13822 863 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 PKP1Q13835 747 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 ZNF234Q14588 700 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 Q6ZNB5 142 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 LRRC69Q6ZNQ3 347 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 PDILTQ8N807 584 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 ZNF507Q8TCN5 953 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 JAKMIP2Q96AA8 810 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 LRRC27Q9C0I9 530 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 PCED1AQ9H1Q7 454 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 VRTNQ9H8Y1 702 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 CSNK1G1Q9HCP0 422 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 ELOVL2Q9NXB9 296 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 ANKRD6Q9Y2G4 727 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 ZNF510Q9Y2H8 683 aa12.94□□□□□ -0.34
TOP3A-215ENST00000583328 A0A087X0B3 334 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 PLK4O00444 970 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 CYP26A1O43174 497 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 TGFB1I1O43294 461 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 STC2O76061 302 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 PENKP01210 267 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-215ENST00000583328 FAM200BP0CF97 657 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 JUPP14923 745 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 ITPKBP27987 946 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 ADORA2BP29275 332 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 CCT8P50990 548 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 COPAP53621 1224 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 ARID5AQ03989 594 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 ORC1Q13415 861 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 PTPRNQ16849 979 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 KLHDC10Q6PID8 442 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 ANKS1BQ7Z6G8 1248 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 TADA2BQ86TJ2 420 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 TMPRSS12Q86WS5 348 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms