RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SLFN12	Q8IYM2	578 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	STAG2	Q8N3U4	1231 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	MFSD2A	Q8NA29	543 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	DDX12P	Q92771	950 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	MBD6	Q96DN6	1003 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	TRMT2B	Q96GJ1	504 aa	Known RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	CPB2	Q96IY4	423 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	JPH2	Q9BR39	696 aa	Predicted RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	EPB41L5	Q9HCM4	733 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	SEMA3G	Q9NS98	782 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	UCKL1	Q9NWZ5	548 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC27A5	Q9Y2P5	690 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	LOXL2	Q9Y4K0	774 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	PCDHGA3	Q9Y5H0	932 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	STON1	Q9Y6Q2	735 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	WASH3P	C4AMC7	463 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	PRRT4	C9JH25	899 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	KLRF2	D3W0D1	207 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772		D6RAR5	112 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	WNT9A	O14904	365 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	KRT86	O43790	486 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	UGT1A3	P35503	534 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ETV5	P41161	510 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	PDE6C	P51160	858 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	PGD	P52209	483 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	PTEN	P60484	403 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ATP2C1	P98194	919 aa	Predicted RBP	5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ZBTB16	Q05516	673 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	POU5F1B	Q06416	359 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ZNF235	Q14590	738 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ARID5B	Q14865	1188 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	CEBPE	Q15744	281 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	KRTAP24-1	Q3LI83	254 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	TMEM164	Q5U3C3	297 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC6A19	Q695T7	634 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ZNF438	Q7Z4V0	828 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	FAM124A	Q86V42	546 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ERC1	Q8IUD2	1116 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	CEP97	Q8IW35	865 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	ATAD1	Q8NBU5	361 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	WFDC11	Q8NEX6	87 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	UBE2Q2	Q8WVN8	375 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	NAT6	Q93015	286 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	OTUB2	Q96DC9	234 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	P2RY11	Q96G91	374 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	MYRFL	Q96LU7	910 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	TMEM74	Q96NL1	305 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	PIGS	Q96S52	555 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	CYP2S1	Q96SQ9	504 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	CXCL16	Q9H2A7	254 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	SPHK2	Q9NRA0	654 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	AASDHPPT	Q9NRN7	309 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	PCDHB8	Q9UN66	801 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	PCDHA12	Q9UN75	941 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	LRP4	O75096	1905 aa		5.34	□□□□□ -1.55
MSI2-216	ENST00000582772	UNC13C	Q8NB66	2214 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	NEDD4	P46934	1319 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	NEMP2	A6NFY4	417 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	C19orf84	I3L1E1	186 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772		K7ESM1	405 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	MASP2	O00187	686 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	LEFTY2	O00292	366 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	FFAR2	O15552	330 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	CYTH3	O43739	400 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	DPM1	O60762	260 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	ATP2C2	O75185	946 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	PIAS2	O75928	621 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	STBD1	O95210	358 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	NPTXR	O95502	500 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	ZFY	P08048	801 aa	Predicted RBP	5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	OR4Q2	P0C623	313 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	AGA	P20933	346 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	ACO1	P21399	889 aa	Known RBP	5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	LPO	P22079	712 aa	Predicted RBP	5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	GUCY2C	P25092	1073 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	HOXC12	P31275	282 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	YWHAH	Q04917	246 aa	Predicted RBP	5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	PCOLCE	Q15113	449 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	ALDH1L2	Q3SY69	923 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	CCDC178	Q5BJE1	867 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	PERM1	Q5SV97	790 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	BTBD8	Q5XKL5	378 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	RPTN	Q6XPR3	784 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	RD3	Q7Z3Z2	195 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	HOMER1	Q86YM7	354 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	TEX2	Q8IWB9	1127 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	CACNA2D3	Q8IZS8	1091 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	IQCK	Q8N0W5	287 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	UBR7	Q8N806	425 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	EPS8L1	Q8TE68	723 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	LRRC15	Q8TF66	581 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	STARD8	Q92502	1023 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	SECISBP2	Q96T21	854 aa	Known RBP	5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	NFKBIZ	Q9BYH8	718 aa		5.33	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms