RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TSPAN3O60637 253 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 JAK2O60674 1132 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 DTNBO60941 627 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ATP2C2O75185 946 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 FAM13AO94988 1023 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ABL1P00519 1130 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 CISD3P0C7P0 127 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ZDHHC11BP0C7U3 371 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ACADMP11310 421 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TYRP14679 529 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 PLCG1P19174 1290 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 YWHAQP27348 245 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 CTSKP43235 329 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 CSNK1EP49674 416 aaKnown RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TOB1P50616 345 aaPredicted RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TMPRSS3P57727 454 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 CXADRP78310 365 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TFAMQ00059 246 aaKnown RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 CYP27A1Q02318 531 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 GOLGA8FQ08AF8 430 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 GOLGA8DPQ0D2H9 430 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TARDBPQ13148 414 aaKnown RBP eCLIP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 EIF4HQ15056 248 aaKnown RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TBC1D25Q3MII6 688 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TMEM119Q4V9L6 283 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 BROXQ5VW32 411 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ARL6IP4Q66PJ3 421 aaKnown RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ERICH1Q86X53 443 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TMPRSS6Q8IU80 811 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 BRSK2Q8IWQ3 736 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 SPACA3Q8IXA5 215 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 CSGALNACT2Q8N6G5 542 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ZNF248Q8NDW4 579 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 KBTBD7Q8WVZ9 684 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 POMGNT1Q8WZA1 660 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 TSC1Q92574 1164 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 SKA1Q96BD8 255 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 SIPA1Q96FS4 1042 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 MED8Q96G25 268 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 CDK5RAP3Q96JB5 506 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 AK8Q96MA6 479 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 LLPHQ9BRT6 129 aaKnown RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 BBS2Q9BXC9 721 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 SLC6A17Q9H1V8 727 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 THAP10Q9P2Z0 257 aaPredicted RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 DNMT3LQ9UJW3 386 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 R3HCC1Q9Y3T6 440 aaKnown RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 UBR5O95071 2799 aaPredicted RBP6.6□□□□□ -1.35
TVP23B-210ENST00000582288 MYH11P35749 1972 aa6.6□□□□□ -1.35
TVP23B-210ENST00000582288 COL12A1Q99715 3063 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 NPHP3-ACAD11A0A0J9YXS1 232 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 WASH3PC4AMC7 463 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 NEDD8-MDP1E9PL57 170 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 H0Y8X5 98 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 H3BM21 787 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 RNF225M0QZC1 329 aaPredicted RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 ENC1O14682 589 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 SCAMP3O14828 347 aaKnown RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 KIAA0391O15091 583 aaKnown RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 TRIM24O15164 1050 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 VILLO15195 856 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 TIMM44O43615 452 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 BRINP1O60477 761 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 SYNCRIPO60506 623 aaKnown RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 GREM1O60565 184 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 TACC1O75410 805 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 DXOO77932 396 aaKnown RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 LDOC1O95751 146 aaPredicted RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 LMO2P25791 158 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 CD27P26842 260 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 ADSSP30520 456 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 ACADVLP49748 655 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 COPAP53621 1224 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 PSMC1P62191 440 aaKnown RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 GUCY1B3Q02153 619 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 ZBTB16Q05516 673 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 GRIN1Q05586 938 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 KCNH2Q12809 1159 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 CCDC142Q17RM4 750 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 HES3Q5TGS1 186 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 KLHDC10Q6PID8 442 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 XKR5Q6UX68 686 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 ZNF720Q7Z2F6 126 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 FMNL3Q8IVF7 1028 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 LSMEM2Q8N112 164 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 DCBLD1Q8N8Z6 715 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 UCMAQ8WVF2 138 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 TTC9Q92623 222 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 HPDLQ96IR7 371 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 HIC2Q96JB3 615 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 ZNF578Q96N58 590 aaPredicted RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 HNRNPABQ99729 332 aaKnown RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 STRA6Q9BX79 667 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 DPH1Q9BZG8 443 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 FBRSQ9HAH7 460 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 TM9SF3Q9HD45 589 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 RBAKQ9NYW8 714 aaPredicted RBP6.59□□□□□ -1.35
TVP23B-210ENST00000582288 SIX4Q9UIU6 781 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 LSM7Q9UK45 103 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms