RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 IFRD2Q12894 506 aaPredicted RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 TAF10Q12962 218 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 TMEM132DQ14C87 1099 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 SKIDA1Q1XH10 827 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 CFAP221Q4G0U5 840 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 RNF20Q5VTR2 975 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 SFMBT2Q5VUG0 894 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 TMEM215Q68D42 235 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 GRAMD4Q6IC98 578 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 RINT1Q6NUQ1 792 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 ATG14Q6ZNE5 492 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 TPGS1Q6ZTW0 290 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 C1orf186Q6ZWK4 172 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 TRMT11Q7Z4G4 463 aaKnown RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 APBB1IPQ7Z5R6 666 aaPredicted RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 METTL3Q86U44 580 aaKnown RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 TRIM22Q8IYM9 498 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 DCP1BQ8IZD4 617 aaKnown RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 FBXL16Q8N461 479 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 RBBP8NLQ8NC74 664 aaPredicted RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 KCNV2Q8TDN2 545 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 KBTBD7Q8WVZ9 684 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 SCARF2Q96GP6 870 aaPredicted RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 TTLL2Q9BWV7 592 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 FAM117AQ9C073 453 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 CCSER1Q9C0I3 900 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 EPN3Q9H201 632 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 CCSER2Q9H7U1 834 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 ABCB6Q9NP58 842 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 DDX19AQ9NUU7 478 aaKnown RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 DDX43Q9NXZ2 648 aaKnown RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 TRPM5Q9NZQ8 1165 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 UXTQ9UBK9 157 aaPredicted RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 SERGEFQ9UGK8 458 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 CPSF3Q9UKF6 684 aaKnown RBP4.4□□□□□ -1.71
CTC1-209ENST00000581729 KIAA1024Q9UPX6 916 aa4.4□□□□□ -1.71
CTC1-209ENST00000581729 PLXNA2O75051 1894 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 A0A0B4J269 797 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 LY6G6EA0A0G2JKS1 128 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 A0A1W2PR77 199 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 F8VP50 259 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 GABRDO14764 452 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 MDM4O15151 490 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 ZBTB24O43167 697 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 CACNG3O60359 315 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 TSPAN3O60637 253 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 SDC3O75056 442 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 USP12O75317 370 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 DXOO77932 396 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 FSBPO95073 299 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 TBX18O95935 607 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 WT1P19544 449 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 POLR2BP30876 1174 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 KRT2P35908 639 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 CCT6AP40227 531 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 MATR3P43243 847 aaKnown RBP eCLIP4.39□□□□□ -1.71
CTC1-209ENST00000581729 UCNP55089 124 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 CYP4F2P78329 520 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 TSPY1Q01534 308 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 ST3GAL1Q11201 340 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 SMARCB1Q12824 385 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 CLN3Q13286 438 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 ENPP2Q13822 863 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 CLCA4Q14CN2 919 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 NFE2Q16621 373 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 SWT1Q5T5J6 900 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 BROXQ5VW32 411 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 CDCP2Q5VXM1 449 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 FAM171BQ6P995 826 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 BLOC1S2Q6QNY1 142 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 CRELD2Q6UXH1 353 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 ZPBP2Q6X784 338 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 DENND5BQ6ZUT9 1274 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 METTL23Q86XA0 190 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 SPATS2Q86XZ4 545 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 PTRH1Q86Y79 214 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 SPATA2LQ8IUW3 424 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 THEM5Q8N1Q8 247 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 C1orf127Q8N9H9 656 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 HTR3CQ8WXA8 447 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 SIPA1Q96FS4 1042 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 ZNF578Q96N58 590 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 ELF4Q99607 663 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 SPOCK3Q9BQ16 436 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 ACBD6Q9BR61 282 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 MMTAG2Q9BU76 263 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 DPEP3Q9H4B8 488 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 MTG2Q9H4K7 406 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 RPF1Q9H9Y2 349 aaKnown RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 DPP3Q9NY33 737 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 THAP10Q9P2Z0 257 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 SIX4Q9UIU6 781 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 DSEQ9UL01 958 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 U3KQA8 63 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 TP53BP1Q12888 1972 aaPredicted RBP4.39□□□□□ -1.71
CTC1-209ENST00000581729 HIVEP1P15822 2718 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 PTPRJQ12913 1337 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 F8P00451 2351 aa4.39□□□□□ -1.71
CTC1-209ENST00000581729 A0A1B0GVM2 712 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms