RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 HS2ST1Q7LGA3 356 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 GPR155Q7Z3F1 870 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 BBS7Q8IWZ6 715 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 GRAMD1CQ8IYS0 662 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 NOC3LQ8WTT2 800 aaKnown RBP11.37□□□□□ -0.59
TOP3A-210ENST00000580713 SNX19Q92543 992 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 XPO6Q96QU8 1125 aaKnown RBP11.37□□□□□ -0.59
TOP3A-210ENST00000580713 ARID3AQ99856 593 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 GABRG3Q99928 467 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 FAM213AQ9BRX8 229 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 WSB2Q9NYS7 404 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-210ENST00000580713 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 EIF2B4Q9UI10 523 aaKnown RBP11.37□□□□□ -0.59
TOP3A-210ENST00000580713 ITGA11Q9UKX5 1188 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 NFE2L3Q9Y4A8 694 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 CABIN1Q9Y6J0 2220 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 CAPN8A6NHC0 703 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 WASH3PC4AMC7 463 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 NEDD8-MDP1E9PL57 170 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 TLX3O43711 291 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-210ENST00000580713 SMC2O95347 1197 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 MYL1P05976 194 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 TMEM191BP0C7N4 346 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 GRK6P43250 576 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 CSNK1EP49674 416 aaKnown RBP11.36□□□□□ -0.59
TOP3A-210ENST00000580713 WNT7BP56706 349 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
TOP3A-210ENST00000580713 AMPD3Q01432 767 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 MYO1EQ12965 1108 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 MCM6Q14566 821 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 STARD3Q14849 445 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 TAF1BQ53T94 588 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-210ENST00000580713 MDH1BQ5I0G3 518 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 SCARA3Q6AZY7 606 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 SASS6Q6UVJ0 657 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 DBX2Q6ZNG2 339 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 TMPRSS12Q86WS5 348 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 CADM4Q8NFZ8 388 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 BAP1Q92560 729 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 ERCC4Q92889 916 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-210ENST00000580713 SMARCE1Q969G3 411 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 FBXO32Q969P5 355 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 PCED1BQ96HM7 432 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 FAM84AQ96KN4 292 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 BBS2Q9BXC9 721 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 LRRC27Q9C0I9 530 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 NACA2Q9H009 215 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 IKZF4Q9H2S9 585 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 CD248Q9HCU0 757 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 CRTAC1Q9NQ79 661 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 KBTBD4Q9NVX7 518 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 STYXL1Q9Y6J8 313 aa11.36□□□□□ -0.59
TOP3A-210ENST00000580713 PTPRQQ9UMZ3 2332 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 TEX51A0A1B0GUA7 166 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 METTL12A8MUP2 240 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 PRRT4C9JH25 899 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 GFRA2O00451 464 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 ARHGAP6O43182 974 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 COCHO43405 550 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 YWHAQP27348 245 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 OXTRP30559 389 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 HNF1BP35680 557 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 ZNF131P52739 623 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 DPYDQ12882 1025 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 CUL4BQ13620 913 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 FUT11Q495W5 492 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 HECTD3Q5T447 861 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 TPGS1Q6ZTW0 290 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 DPH6Q7L8W6 267 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 BRSK2Q8IWQ3 736 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 PDZD8Q8NEN9 1154 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 SAAL1Q96ER3 474 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 C8orf48Q96LL4 319 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 MMS19Q96T76 1030 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 CLMPQ9H6B4 373 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 ITM2CQ9NQX7 267 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 RBAKQ9NYW8 714 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-210ENST00000580713 GMIPQ9P107 970 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 FTSJ1Q9UET6 329 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 CHORDC1Q9UHD1 332 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-210ENST00000580713 PCDHA5Q9Y5H7 936 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 SNX11Q9Y5W9 270 aa11.35□□□□□ -0.59
TOP3A-210ENST00000580713 CFAP46Q8IYW2 2715 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 KCNJ18B7U540 433 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 KCNK3O14649 394 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 ACADMP11310 421 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 TYRP14679 529 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 CASP1P29466 404 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 ADSSP30520 456 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 AFF3P51826 1226 aaKnown RBP11.34□□□□□ -0.59
TOP3A-210ENST00000580713 CLDN6P56747 220 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 CXADRP78310 365 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 TYRO3Q06418 890 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 TEAD4Q15561 434 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 PTPRNQ16849 979 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 KIF19Q2TAC6 998 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 INAVAQ3KP66 663 aa11.34□□□□□ -0.59
TOP3A-210ENST00000580713 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
TOP3A-210ENST00000580713 FAM124AQ86V42 546 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms