RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CAPN7Q9Y6W3 813 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SYN3O14994 580 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FYNP06241 537 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 GBP1P32455 592 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ADCY8P40145 1251 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FPGSQ05932 587 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TMEM240Q5SV17 173 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MFSD7Q6UXD7 560 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 HAUS1Q96CS2 278 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TMEM175Q9BSA9 504 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 COL4A6Q14031 1691 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LCHNA4D1U4 455 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PEX14O75381 377 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 VNN2O95498 520 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SDC4P31431 198 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ACADSBP45954 432 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RNF187Q5TA31 235 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLC26A9Q7LBE3 791 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 KATNAL2Q8IYT4 538 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EPS8L3Q8TE67 593 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DMAP1Q9NPF5 467 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 XIRP2A4UGR9 3374 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 LRRD1A4D1F6 860 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RNF8O76064 485 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 OR1D2P34982 312 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 HDAC4P56524 1084 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 YWHAZP63104 245 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DUSP4Q13115 394 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ZC3H12AQ5D1E8 599 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 KIAA1841Q6NSI8 718 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CYP4V2Q6ZWL3 525 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 B4GALNT4Q76KP1 1039 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 BHLHA9Q7RTU4 235 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EXD1Q8NHP7 514 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 GRK7Q8WTQ7 553 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TBCBQ99426 244 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ZBED2Q9BTP6 218 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FAM117AQ9C073 453 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 VWA8A3KMH1 1905 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TPD52L2O43399 206 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ZBED1O96006 694 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ATF2P15336 505 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MAN1A1P33908 653 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLC5A3P53794 718 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DAOAP59103 153 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 USP46P62068 366 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CA9Q16790 459 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RAB41Q5JT25 222 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FAM131BQ86XD5 332 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ATL2Q8NHH9 583 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ART4Q93070 314 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SEPT5Q99719 369 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TXLNGYQ9BZA5 131 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ASNSD1Q9NWL6 643 aa13.19□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 GJB5O95377 273 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ACSL3O95573 720 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NCAM1P13591 858 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 EIF3BP55884 814 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PPP2R2AP63151 447 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 NME3Q13232 169 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 HOOK3Q86VS8 718 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ARFGAP2Q8N6H7 521 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SNF8Q96H20 258 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SELENOSQ9BQE4 189 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 IGSF5Q9NSI5 407 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 UNC80Q8N2C7 3258 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TSC2P49815 1807 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 WDR27A2RRH5 827 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 A6NNZ2 444 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 KIAA0754O94854 1291 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FSBPO95073 299 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TRUB2O95900 331 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MYOGP15173 224 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PAX3P23760 479 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CA8P35219 290 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 ITGA8P53708 1063 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DYNLT1P63172 113 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MAPRE1Q15691 268 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MGAT5BQ3V5L5 792 aa13.18□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TUBB8Q3ZCM7 444 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms