RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PRPF4BQ13523 1007 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SCARB2Q14108 478 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 HABP2Q14520 560 aaPredicted RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SMAD1Q15797 465 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 BAK1Q16611 211 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TRIM71Q2Q1W2 868 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 FLYWCH1Q4VC44 716 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ODF2Q5BJF6 829 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SLC9C2Q5TAH2 1124 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 RRAGBQ5VZM2 374 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 GPR139Q6DWJ6 353 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 NAA16Q6N069 864 aaPredicted RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 RPUSD3Q6P087 351 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF449Q6P9G9 518 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 KRT28Q7Z3Y7 464 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 PRPF39Q86UA1 669 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 BRSK2Q8IWQ3 736 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TRMT2AQ8IZ69 625 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TEX9Q8N6V9 391 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ANKRD53Q8N9V6 530 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 USP38Q8NB14 1042 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SMRP1Q8NCR6 262 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 APPL2Q8NEU8 664 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 OR8H1Q8NGG4 311 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ST8SIA2Q92186 375 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 RSC1A1Q92681 617 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CUL5Q93034 780 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SH3KBP1Q96B97 665 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 FEM1CQ96JP0 617 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TRAPPC9Q96Q05 1148 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TWNKQ96RR1 684 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 DPH1Q9BZG8 443 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 OR10A5Q9H207 317 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 KCNH6Q9H252 994 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CHST8Q9H2A9 424 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 MRPL46Q9H2W6 279 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 MTG2Q9H4K7 406 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 MLXIPQ9HAP2 919 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TBC1D23Q9NUY8 699 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 EPS15L1Q9UBC2 864 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 MTRRQ9UBK8 725 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SEL1LQ9UBV2 794 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF212Q9UDV6 495 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ADD3Q9UEY8 706 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 EIF2B4Q9UI10 523 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TMCC3Q9ULS5 477 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SCAF8Q9UPN6 1271 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CNPY2Q9Y2B0 182 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 MTO1Q9Y2Z2 717 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CUX1P39880 1505 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ABCA10Q8WWZ4 1543 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CD109Q6YHK3 1445 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 RPTORQ8N122 1335 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 PREX1Q8TCU6 1659 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 A0A0A6YYJ9 748 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 hCG_1807616A0A1W2PRN6 198 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 PIPSLA2A3N6 862 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 CCDC78A2IDD5 438 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 LRRC3CA6NJW4 275 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 AHRRA9YTQ3 701 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 C19orf81C9J6K1 198 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 PYCARD-AS1I3L0S3 204 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TSPAN3O60637 253 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TOM1O60784 492 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 OPHN1O60890 802 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 PROP1O75360 226 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 C1QL1O75973 258 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 GLP2RO95838 553 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ANXA1P04083 346 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 A1BGP04217 495 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ADRB2P07550 413 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 NPPBP16860 134 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 IL11P20809 199 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 PSMA4P25789 261 aaKnown RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 PRDX5P30044 214 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ECHS1P30084 290 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MSH2P43246 934 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MCM2P49736 904 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 FLT3LGP49771 235 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 RGS3P49796 1198 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 FOXG1P55316 489 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ADAM8P78325 824 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 IFI35P80217 286 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TMF1P82094 1093 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MXRA7P84157 204 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TLE1Q04724 770 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MPP3Q13368 585 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ACVR2BQ13705 512 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MAPKAPK3Q16644 382 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MAN2A1Q16706 1144 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 CTXN3Q4LDR2 81 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ARHGAP15Q53QZ3 475 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 CCDC158Q5M9N0 1113 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 EMC10Q5UCC4 262 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ATG16L1Q676U5 607 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 KLHL24Q6TFL4 600 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MFSD6Q6ZSS7 791 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 CPLX4Q7Z7G2 160 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms