RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
ERBB2-206ENST00000578373 RUBCNLQ9H714 662 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 EML4Q9HC35 981 aaKnown RBP12.39□□□□□ -0.43
ERBB2-206ENST00000578373 SIX2Q9NPC8 291 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 CASS4Q9NQ75 786 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 TCF7L2Q9NQB0 619 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.39□□□□□ -0.43
ERBB2-206ENST00000578373 DCDC2Q9UHG0 476 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 UBQLN1Q9UMX0 589 aaKnown RBP12.39□□□□□ -0.43
ERBB2-206ENST00000578373 UBIAD1Q9Y5Z9 338 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 LYPLA1O75608 230 aaPredicted RBP12.39□□□□□ -0.43
ERBB2-206ENST00000578373 MAP4P27816 1152 aaKnown RBP12.39□□□□□ -0.43
ERBB2-206ENST00000578373 CAPSQ13938 189 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 UBAP2LQ14157 1087 aaKnown RBP12.39□□□□□ -0.43
ERBB2-206ENST00000578373 TEDDM1Q5T9Z0 273 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 HTR3CQ8WXA8 447 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 SNX19Q92543 992 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 CDRT15Q96T59 188 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 PORCNQ9H237 461 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 VANGL2Q9ULK5 521 aa12.39□□□□□ -0.43
ERBB2-206ENST00000578373 SRP72O76094 671 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MGAT5Q09328 741 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 LAMC2Q13753 1193 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 BNC2Q6ZN30 1099 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 AMIGO3Q86WK7 504 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 SNX32Q86XE0 403 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 ALLCQ8N6M5 410 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MIEF2Q96C03 454 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 LGMNQ99538 433 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 APOL5Q9BWW9 433 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 B3GNT5Q9BYG0 378 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 FRMD8Q9BZ67 464 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 ACOT9Q9Y305 439 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MYO9BQ13459 2157 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 ERI2A8K979 691 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 ACKR2O00590 384 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 EIF4BP23588 611 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 HMOX2P30519 316 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 FDFT1P37268 417 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 NAGLUP54802 743 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MRPS22P82650 360 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 ZNF268Q14587 947 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 PDK4Q16654 411 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CCL15Q16663 113 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CHSY1Q86X52 802 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 ADGRF2Q8IZF7 708 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 SPATA6LQ8N4H0 392 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 HELQQ8TDG4 1101 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CLPTM1LQ96KA5 538 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 FICDQ9BVA6 458 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 EFCAB1Q9HAE3 211 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MRC1P22897 1456 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 GON4LQ3T8J9 2241 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 hCG_1818297A0A087WSY0 165 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 BUD23O43709 281 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 IRF1P10914 325 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 OR1G1P47890 313 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MAPK10P53779 464 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 BCAT1P54687 386 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 OCA2Q04671 838 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 PTK2BQ14289 1009 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MGAT5BQ3V5L5 792 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 SV2CQ496J9 727 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 THEMIS2Q5TEJ8 643 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 ZBTB46Q86UZ6 589 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 GPRC5AQ8NFJ5 357 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 TCRBV9S1A1TA0A576 114 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 SAC3D1A6NKF1 404 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 M0R2N6 131 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CYP2C8P10632 490 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 THRAP10827 490 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 RAG1P15918 1043 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 STMN1P16949 149 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CYLC2Q14093 348 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 TRMT5Q32P41 509 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 SEMA6AQ9H2E6 1030 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 MRPL40Q9NQ50 206 aaKnown RBP12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CD274Q9NZQ7 290 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 CCDC167Q9P0B6 97 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
ERBB2-206ENST00000578373 NFAT5O94916 1531 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 CD48P09326 243 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 KYAT1Q16773 422 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 SLC45A4Q5BKX6 768 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 PCDH20Q8N6Y1 951 aaKnown RBP12.37□□□□□ -0.43
ERBB2-206ENST00000578373 PCYOX1LQ8NBM8 494 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 VPS50Q96JG6 964 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 ZNF512Q96ME7 567 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-206ENST00000578373 RPRD1AQ96P16 312 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-206ENST00000578373 GRHL1Q9NZI5 618 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms