RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 NR3C1P04150 777 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 PIK3CAP42336 1068 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 CDH8P55286 799 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 SFSWAPQ12872 951 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 TRIP6Q15654 476 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 PLEKHG6Q3KR16 790 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 ARHGAP17Q68EM7 881 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 NUP58Q9BVL2 599 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 GTPBP2Q9BX10 602 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 DUSP16Q9BY84 665 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 NIF3L1Q9GZT8 377 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 PRDM16Q9HAZ2 1276 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 STRIP2Q9ULQ0 834 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 CYP8B1Q9UNU6 501 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 MEI4A8MW99 385 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 TAF4O00268 1085 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 FLRT2O43155 660 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 STC2O76061 302 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 IRF1P10914 325 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 CDK4P11802 303 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 CCDC130P13994 396 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 RPL13P26373 211 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 MFAP3P55082 362 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 SUZ12Q15022 739 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 FYB2Q5VWT5 728 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 CCNI2Q6ZMN8 369 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 SV2AQ7L0J3 742 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 PROSER1Q86XN7 944 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 RBBP8NLQ8NC74 664 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 BAHD1Q8TBE0 780 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 KLK13Q9UKR3 277 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 ATXN2Q99700 1313 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 PRRT4C9JH25 899 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 CILPO75339 1184 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 HLA-DRAP01903 254 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 VAMP7P51809 220 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 SLC8A3P57103 927 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 ACAP1Q15027 740 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 INAVAQ3KP66 663 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 PIWIL1Q96J94 861 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 STOML2Q9UJZ1 356 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 LHX6Q9UPM6 363 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 HBS1LQ9Y450 684 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 CKAP5Q14008 2032 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 ABCA7Q8IZY2 2146 aa11.8□□□□□ -0.52
SMARCE1-214ENST00000578112 SPAARA0A1B0GVQ0 90 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 SYNCRIPO60506 623 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 KRT13P13646 458 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 MATKP42679 507 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 CUL4BQ13620 913 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 RAB41Q5JT25 222 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 C10orf120Q5SQS8 335 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 RGL4Q8IZJ4 473 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 PRCCQ92733 491 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 GOLGA1Q92805 767 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 WBP2Q969T9 261 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 GTPBP4Q9BZE4 634 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 TMEM8AQ9HCN3 771 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 RCOR1Q9UKL0 485 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 SCML1Q9UN30 329 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 A0A1W2PQH9 124 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 CBFA2T3O75081 653 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 BEST1O76090 585 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 NCAM1P13591 858 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 YWHAEP62258 255 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 GRIK2Q13002 908 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 TEAD4Q15561 434 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 MPPE1Q53F39 396 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 KIAA1211LQ6NV74 962 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 KIAA1324Q6UXG2 1013 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 TOGARAM2Q6ZUX3 1019 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 MIB1Q86YT6 1006 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 FRMD1Q8N878 549 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 KIAA0895Q8NCT3 520 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 PCOLCE2Q9UKZ9 415 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 PCDHA7Q9UN72 937 aa11.79□□□□□ -0.52
SMARCE1-214ENST00000578112 MUC22E2RYF6 1773 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 CYP26A1O43174 497 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 ACTN4O43707 911 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 FTH1P19P0C7X4 201 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 ZSCAN22P10073 491 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 CASP4P49662 377 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 FUT11Q495W5 492 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 KMT5BQ4FZB7 885 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 KIAA0907Q7Z7F0 614 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 GALNT15Q8N3T1 639 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 OR2T3Q8NH03 318 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 PAGE5Q96GU1 130 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 OSER1Q9NX31 292 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms