RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CA14Q9ULX7 337 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 HCFC2Q9Y5Z7 792 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 MRFAP1Q9Y605 127 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 CDY1Q9Y6F8 540 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 MYO16Q9Y6X6 1858 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 MTMR11A4FU01 709 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 LAMTOR5O43504 91 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 LILRB5O75023 590 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 LRP3O75074 770 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 FLT3P36888 993 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 GRIK1P39086 918 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 ACADSBP45954 432 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 RPL34P49207 117 aaKnown RBP10.53□□□□□ -0.72
CRLF3-202ENST00000577725 GLUD2P49448 558 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 GSCP56915 257 aaPredicted RBP10.53□□□□□ -0.72
CRLF3-202ENST00000577725 SLC8A3P57103 927 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 TAS2R40P59535 323 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 ZNF211Q13398 564 aaPredicted RBP10.53□□□□□ -0.72
CRLF3-202ENST00000577725 MAPRE1Q15691 268 aaKnown RBP10.53□□□□□ -0.72
CRLF3-202ENST00000577725 DDR2Q16832 855 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 IL31Q6EBC2 164 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 AADACL2Q6P093 401 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 ANKS3Q6ZW76 656 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 OTOP3Q7RTS5 596 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 VPS52Q8N1B4 723 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 SIX6OS1Q8N1H7 587 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 GPR152Q8TDT2 470 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 STK32AQ8WU08 396 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 RXFP2Q8WXD0 754 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 PIK3R5Q8WYR1 880 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 MS4A14Q96JA4 679 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 HSFY1Q96LI6 401 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 TCF25Q9BQ70 676 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 CARD6Q9BX69 1037 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 NGRNQ9NPE2 291 aaKnown RBP10.53□□□□□ -0.72
CRLF3-202ENST00000577725 DMAP1Q9NPF5 467 aaPredicted RBP10.53□□□□□ -0.72
CRLF3-202ENST00000577725 ENTPD7Q9NQZ7 604 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 KLHL11Q9NVR0 708 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 MTRRQ9UBK8 725 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 CDC23Q9UJX2 597 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 SNX12Q9UMY4 172 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 LZTS1Q9Y250 596 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 PCDHB5Q9Y5E4 795 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 SAR1BQ9Y6B6 198 aa10.53□□□□□ -0.72
CRLF3-202ENST00000577725 WDFY3Q8IZQ1 3526 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CEP295Q9C0D2 2601 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 WDR27A2RRH5 827 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 HIDE1A8MVS5 230 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 KCNK3O14649 394 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 URODP06132 367 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 USP17L7P0C7H9 530 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 GLULP15104 373 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 TFE3P19532 575 aaPredicted RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 GPD1P21695 349 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 OR1D2P34982 312 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 ROR1Q01973 937 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 DSG1Q02413 1049 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CSTF1Q05048 431 aaKnown RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 C15orf59Q2T9L4 293 aaPredicted RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 RARS2Q5T160 578 aaKnown RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 SH3PXD2AQ5TCZ1 1133 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 DCAF12L1Q5VU92 463 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 PRR23BQ6ZRT6 265 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 DDX53Q86TM3 631 aaKnown RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 PJA1Q8NG27 643 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 SCAMP5Q8TAC9 235 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 KCTD13Q8WZ19 329 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 ALG3Q92685 438 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CD101Q93033 1021 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 HES6Q96HZ4 224 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CFAP57Q96MR6 1250 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 SEPT5Q99719 369 aaPredicted RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CLSTN3Q9BQT9 956 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CSNK1G1Q9HCP0 422 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CYLDQ9NQC7 956 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 CHST7Q9NS84 486 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 SPATA6Q9NWH7 488 aaPredicted RBP10.52□□□□□ -0.73
CRLF3-202ENST00000577725 IP6K2Q9UHH9 426 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 TMEM59LQ9UK28 342 aa10.52□□□□□ -0.73
CRLF3-202ENST00000577725 C2CD4BA6NLJ0 364 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CYSRT1A8MQ03 144 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CEP104O60308 925 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 DAB1O75553 588 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 PDGFRAP16234 1089 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CTNNA2P26232 953 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 PPM1AP35813 382 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 SLC5A3P53794 718 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 SNX16P57768 344 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 DAOAP59103 153 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 PITX1P78337 314 aaPredicted RBP10.51□□□□□ -0.73
CRLF3-202ENST00000577725 ATP11AP98196 1134 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 DUSP4Q13115 394 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 LLGL1Q15334 1064 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 NFE2Q16621 373 aaPredicted RBP10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CDO1Q16878 200 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 MGAT5BQ3V5L5 792 aa10.51□□□□□ -0.73
CRLF3-202ENST00000577725 CCDC14Q49A88 953 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms