RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-205	ENST00000577667	TPCN1	Q9ULQ1	816 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CCNB3	Q8WWL7	1395 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	LRRC9	Q6ZRR7	1453 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CEP152	O94986	1710 aa		4.09	□□□□□ -1.76
PPP4R1-205	ENST00000577667	TRIM38	O00635	465 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PRPF3	O43395	683 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PIAS2	O75928	621 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ZKSCAN1	P17029	563 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PGD	P52209	483 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PRDM15	P57071	1507 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ARHGEF7	Q14155	803 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	KCNB1	Q14721	858 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	SHPRH	Q149N8	1683 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CNGA2	Q16280	664 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MINDY4	Q4G0A6	757 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	C3orf38	Q5JPI3	329 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	TMEM63B	Q5T3F8	832 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	FAM102B	Q5T8I3	360 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	NRAC	Q8N912	160 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MROH1	Q8NDA8	1641 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	C16orf52	Q8NHV5	167 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MAP4K1	Q92918	833 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	WAC	Q9BTA9	647 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	FAM204A	Q9H8W3	233 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	TRIM36	Q9NQ86	728 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	C1orf112	Q9NSG2	853 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MTMR4	Q9NYA4	1195 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MGAT4C	Q9UBM8	478 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	L1RE1	Q9UN81	338 aa		4.08	□□□□□ -1.76
PPP4R1-205	ENST00000577667	TET3	O43151	1660 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PIK3C2B	O00750	1634 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	NWD1	Q149M9	1564 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CAMSAP2	Q08AD1	1489 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CCDC141	Q6ZP82	1450 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	RAB27B	O00194	218 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	EXOC5	O00471	708 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	SCGB1D2	O95969	90 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ACVR2A	P27037	513 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	HOXD9	P28356	352 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	GATM	P50440	423 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	RPS16	P62249	146 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	STK3	Q13188	491 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	SLC29A2	Q14542	456 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	RBMS2	Q15434	407 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	SEC23B	Q15437	767 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	NPY5R	Q15761	445 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ZNF750	Q32MQ0	723 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	TMTC4	Q5T4D3	741 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	C10orf25	Q5T742	122 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ZNF772	Q68DY9	489 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CHPF	Q8IZ52	775 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	DHX36	Q9H2U1	1008 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PI4KB	Q9UBF8	816 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	OGDHL	Q9ULD0	1010 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	RIMKLB	Q9ULI2	386 aa		4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CHD2	O14647	1828 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-205	ENST00000577667	RGS12	O14924	1447 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	FGD6	Q6ZV73	1430 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	TMEM2	Q9UHN6	1383 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667		A6NNZ2	444 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	AGPS	O00116	658 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PARP1	P09874	1014 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	IL1R1	P14778	569 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CPT1A	P50416	773 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CACNB3	P54284	484 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	FOXG1	P55316	489 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ZNF91	Q05481	1191 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	PPP2R5A	Q15172	486 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ARHGAP29	Q52LW3	1261 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CC2D1B	Q5T0F9	858 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	VSTM1	Q6UX27	236 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	RANBP10	Q6VN20	620 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	LIX1L	Q8IVB5	337 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	NGDN	Q8NEJ9	315 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	LRTOMT	Q8WZ04	291 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	SIGLEC11	Q96RL6	698 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	GAR1	Q9NY12	217 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	COL20A1	Q9P218	1284 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MID2	Q9UJV3	735 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	KDM5A	P29375	1690 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	ARHGEF5	Q12774	1597 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	DIP2A	Q14689	1571 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	SETBP1	Q9Y6X0	1596 aa		4.06	□□□□□ -1.76
PPP4R1-205	ENST00000577667	NKTR	P30414	1462 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MSH6	P52701	1360 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MTUS2	Q5JR59	1369 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MYO5B	Q9ULV0	1848 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	LY6G6E	A0A0G2JKS1	128 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MYMK	A6NI61	221 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	AQP7P3	A6NL99	342 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667		A8MVJ9	347 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667		H3BNC9	293 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	CLIC1	O00299	241 aa		4.05	□□□□□ -1.76
PPP4R1-205	ENST00000577667	MAP4K4	O95819	1239 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms