RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 PGAP3Q96FM1 320 aaPredicted RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 ZFRQ96KR1 1074 aaKnown RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 CCDC42Q96M95 316 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 FAM83CQ9BQN1 747 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 DDX23Q9BUQ8 820 aaKnown RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 C8orf33Q9H7E9 229 aaPredicted RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 MRPL47Q9HD33 250 aaKnown RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 PARVAQ9NVD7 372 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.92□□□□□ -0.34
RARA-208ENST00000577646 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.92□□□□□ -0.34
RARA-208ENST00000577646 ARHGAP20Q9P2F6 1191 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 LCMT1Q9UIC8 334 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 TMEM59LQ9UK28 342 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 CCL26Q9Y258 94 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 TLR6Q9Y2C9 796 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 PIK3R2O00459 728 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 NFATC1O95644 943 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 TBX18O95935 607 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 FTLP02792 175 aaPredicted RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 ASGR2P07307 311 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 KRT3P12035 628 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 GDI1P31150 447 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 CHKAP35790 457 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 IFNAR2P48551 515 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 MRE11P49959 708 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 ADKP55263 362 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 GSDMDP57764 484 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 PRKCQQ04759 706 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 SLC18A3Q16572 532 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 SLC25A52Q3SY17 297 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 DCAF6Q58WW2 860 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 FAM102AQ5T9C2 384 aaPredicted RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 ALKBH5Q6P6C2 394 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 HFE2Q6ZVN8 426 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 SUGP1Q8IWZ8 645 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 DEFB106AQ8N104 65 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 CPA6Q8N4T0 437 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 TC2NQ8N9U0 490 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 CSGALNACT1Q8TDX6 532 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 CLEC4CQ8WTT0 213 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 RSAD2Q8WXG1 361 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 NDRG1Q92597 394 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 EDEM1Q92611 657 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 RSPRY1Q96DX4 576 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 NELL2Q99435 816 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 DDX50Q9BQ39 737 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.91□□□□□ -0.34
RARA-208ENST00000577646 RPP25Q9BUL9 199 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 PLA2G2FQ9BZM2 168 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 GRPEL1Q9HAV7 217 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 LUC7LQ9NQ29 371 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 GKN1Q9NS71 199 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 DUS2Q9NX74 493 aaKnown RBP12.91□□□□□ -0.34
RARA-208ENST00000577646 CFAP97Q9P2B7 532 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 SLC12A6Q9UHW9 1150 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 MYO16Q9Y6X6 1858 aa12.91□□□□□ -0.34
RARA-208ENST00000577646 SLC12A8A0AV02 714 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 MAN2B1O00754 1011 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 AKR1B10O60218 316 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 STC2O76061 302 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 ENDOD1O94919 500 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 TRUB2O95900 331 aaKnown RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 IGLV3-25P01717 112 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 IGLV3-27P01718 113 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 FECHP22830 423 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 EIF4A3P38919 411 aaKnown RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 PTPN9P43378 593 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 TBX4P57082 545 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 GPC5P78333 572 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 EIF4EBP2Q13542 120 aaPredicted RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 ITPRIPL2Q3MIP1 535 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 PREPLQ4J6C6 727 aaPredicted RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 PLEKHA7Q6IQ23 1121 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 SND1Q7KZF4 910 aaKnown RBP eCLIP12.9□□□□□ -0.34
RARA-208ENST00000577646 BMP8AQ7Z5Y6 402 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 MIB1Q86YT6 1006 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 ADGRG2Q8IZP9 1017 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 OLIG1Q8TAK6 271 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 DQX1Q8TE96 717 aaKnown RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 ANP32BQ92688 251 aaKnown RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 LRRC3BQ96PB8 259 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 NPY6RQ99463 290 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 SELENOOQ9BVL4 669 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 SMG9Q9H0W8 520 aaKnown RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
RARA-208ENST00000577646 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 STOML2Q9UJZ1 356 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 INTUQ9ULD6 942 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 NAALADL1Q9UQQ1 740 aa12.9□□□□□ -0.34
RARA-208ENST00000577646 A0A087X0T9 212 aa12.89□□□□□ -0.35
RARA-208ENST00000577646 ARNTLO00327 626 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms