RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 KIAA1211LQ6NV74 962 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 LCLAT1Q6UWP7 414 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 RSRC2Q7L4I2 434 aaKnown RBP12.46□□□□□ -0.41
LITAF-219ENST00000576334 DGLUCYQ7Z3D6 616 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 IRF2BP1Q8IU81 584 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 ZNF513Q8N8E2 541 aaPredicted RBP12.46□□□□□ -0.41
LITAF-219ENST00000576334 HMGB4Q8WW32 186 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 DNAI2Q9GZS0 605 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 SLC6A17Q9H1V8 727 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 LRRC4Q9HBW1 653 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
LITAF-219ENST00000576334 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.46□□□□□ -0.41
LITAF-219ENST00000576334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.46□□□□□ -0.41
LITAF-219ENST00000576334 RAD54BQ9Y620 910 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 TCRBV21S2A2A0A5A6 115 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.45□□□□□ -0.42
LITAF-219ENST00000576334 TSPAN3O60637 253 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 EPN2O95208 641 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 PAEPP09466 180 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 SLC9A1P19634 815 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 DGKGP49619 791 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 ZNF132P52740 706 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 SLC8A3P57103 927 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 DAOAP59103 153 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 YWHAEP62258 255 aaKnown RBP12.45□□□□□ -0.42
LITAF-219ENST00000576334 GOLGA8FQ08AF8 430 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 GOLGA8DPQ0D2H9 430 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 PUM1Q14671 1186 aaKnown RBP eCLIP12.45□□□□□ -0.42
LITAF-219ENST00000576334 GEN1Q17RS7 908 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 BSPRYQ5W0U4 402 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 DENND1BQ6P3S1 775 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 FMNL3Q8IVF7 1028 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 ZNF276Q8N554 614 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 SLC35F5Q8WV83 523 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 ZC3H10Q96K80 434 aaKnown RBP12.45□□□□□ -0.42
LITAF-219ENST00000576334 CNOT6LQ96LI5 555 aaKnown RBP12.45□□□□□ -0.42
LITAF-219ENST00000576334 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
LITAF-219ENST00000576334 MIS12Q9H081 205 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 UBE2TQ9NPD8 197 aaPredicted RBP12.45□□□□□ -0.42
LITAF-219ENST00000576334 CD93Q9NPY3 652 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 CACNA2D2Q9NY47 1150 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 MARK1Q9P0L2 795 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 MBD1Q9UIS9 605 aaPredicted RBP12.45□□□□□ -0.42
LITAF-219ENST00000576334 NUP205Q92621 2012 aa12.45□□□□□ -0.42
LITAF-219ENST00000576334 A0A1W2PQF6 199 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 FAM170AA1A519 330 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 PATE3B3GLJ2 98 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 P4HA2O15460 535 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 KRT5P13647 590 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 GABRG2P18507 467 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 MPLP40238 635 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 SGSHP51688 502 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 COG7P83436 770 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 CREB5Q02930 508 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 LMNB2Q03252 620 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 CNGA2Q16280 664 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 DPCR1Q3MIW9 517 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 FOXR2Q6PJQ5 311 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 ARMCX6Q7L4S7 300 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 SIX6OS1Q8N1H7 587 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 PGBD3Q8N328 593 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 DEFB119Q8N690 84 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 GPR161Q8N6U8 529 aaKnown RBP12.44□□□□□ -0.42
LITAF-219ENST00000576334 TRIML1Q8N9V2 468 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 OLIG1Q8TAK6 271 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 SORCS1Q8WY21 1168 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 KCTD13Q8WZ19 329 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 XPO6Q96QU8 1125 aaKnown RBP12.44□□□□□ -0.42
LITAF-219ENST00000576334 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 FAM124BQ9H5Z6 455 aaPredicted RBP12.44□□□□□ -0.42
LITAF-219ENST00000576334 CD248Q9HCU0 757 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 WDR35Q9P2L0 1181 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 TJP2Q9UDY2 1190 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 CYTH4Q9UIA0 394 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 RWDD2AQ9UIY3 292 aa12.44□□□□□ -0.42
LITAF-219ENST00000576334 CDV3Q9UKY7 258 aaKnown RBP12.44□□□□□ -0.42
LITAF-219ENST00000576334 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 GOLGA6L7A0A1B0GV03 622 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 BECN2A8MW95 431 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 LRP3O75074 770 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 GNA14O95837 355 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 PENKP01210 267 aaPredicted RBP12.43□□□□□ -0.42
LITAF-219ENST00000576334 FYNP06241 537 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 PNMA6AP0CW24 399 aaPredicted RBP12.43□□□□□ -0.42
LITAF-219ENST00000576334 SETSIPP0DME0 302 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 HOXB2P14652 356 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 NTSR1P30989 418 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 GCNT1Q02742 428 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 TRIP4Q15650 581 aaPredicted RBP12.43□□□□□ -0.42
LITAF-219ENST00000576334 ARHGAP44Q17R89 818 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 USP39Q53GS9 565 aaKnown RBP12.43□□□□□ -0.42
LITAF-219ENST00000576334 EOGTQ5NDL2 527 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 PLA2G2CQ5R387 149 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 PMS2CLQ68D20 193 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 ERMP1Q7Z2K6 904 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 TADA2BQ86TJ2 420 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 SCUBE3Q8IX30 993 aa12.43□□□□□ -0.42
LITAF-219ENST00000576334 TMEFF1Q8IYR6 380 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms