RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 DIS3LQ8TF46 1054 aaKnown RBP6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 UBLCP1Q8WVY7 318 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 RSAD2Q8WXG1 361 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 P3H4Q92791 437 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 NTAN1Q96AB6 310 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 VWCEQ96DN2 955 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 PKNOX2Q96KN3 472 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 C8orf48Q96LL4 319 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 OXCT2Q9BYC2 517 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 GPR62Q9BZJ7 368 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 ADAM7Q9H2U9 754 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 EPB41L4BQ9H329 900 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 PABPC3Q9H361 631 aaKnown RBP6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 C11orf49Q9H6J7 331 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 PIGVQ9NUD9 493 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 TMEM39AQ9NV64 488 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 MTMR10Q9NXD2 777 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 SAE1Q9UBE0 346 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 TPX2Q9ULW0 747 aaKnown RBP6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 PLAAQ9Y263 795 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 ATP11BQ9Y2G3 1177 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 PCDHB5Q9Y5E4 795 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 NFS1Q9Y697 457 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 SF3B1O75533 1304 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 ATG2AQ2TAZ0 1938 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 DOCK6Q96HP0 2047 aa6.38□□□□□ -1.39
TRAPPC1-204ENST00000571947 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ABHD14A-ACY1A0A1B0GW23 586 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 BCLAF3A2AJT9 711 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 CFAP69A5D8W1 941 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 H7C0C1 242 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 TRIM66O15016 1216 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 KIAA0355O15063 1070 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 POLR3GO15318 223 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 RNF40O75150 1001 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 DGKIO75912 1065 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 EFEMP2O95967 443 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 IGLV3-25P01717 112 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 NUDT17P0C025 328 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ZSCAN5DPP0CG00 497 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 HSPA8P11142 646 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 NCAM1P13591 858 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 AMPD1P23109 780 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 STIP1P31948 543 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 RPL22P35268 128 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ADRA1BP35368 520 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 GRIK1P39086 918 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ARL4AP40617 200 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ATP5OP48047 213 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 HCAR3P49019 387 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 NR2C2P49116 596 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 CXCR3P49682 368 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ZNF135P52742 658 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 EIF3BP55884 814 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 YWHAGP61981 247 aaKnown RBP eCLIP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ROR1Q01973 937 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 SCAPQ12770 1279 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 SMARCB1Q12824 385 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 GPS1Q13098 491 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 NME3Q13232 169 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 XRCC4Q13426 336 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 MORF4L2Q15014 288 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 P3H1Q32P28 736 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ARL13BQ3SXY8 428 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 EFHC2Q5JST6 749 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 RNASEH2BQ5TBB1 312 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 DARS2Q6PI48 645 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 C1orf228Q6PIY5 440 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 TRMT10CQ7L0Y3 403 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 SCD5Q86SK9 330 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 PRUNE1Q86TP1 453 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 CEP57Q86XR8 500 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 RELL1Q8IUW5 271 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 CDKL3Q8IVW4 592 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 SCN4BQ8IWT1 228 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 UNC45BQ8IWX7 931 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 NUP93Q8N1F7 819 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ZCCHC9Q8N567 271 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 SCAMP5Q8TAC9 235 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 RNF139Q8WU17 664 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 RIN2Q8WYP3 895 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ARL8AQ96BM9 186 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 CSPG4P5Q96PW8 444 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 TMEM121Q9BTD3 319 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 MAGEB5Q9BZ81 275 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 CWH43Q9H720 699 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 FAM204AQ9H8W3 233 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 USP29Q9HBJ7 922 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 TMBIM4Q9HC24 238 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 WDR6Q9NNW5 1121 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 AAASQ9NRG9 546 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ABCC13Q9NSE7 274 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 TMEM51Q9NW97 253 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 COMMD8Q9NX08 183 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 ABI2Q9NYB9 513 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 IL37Q9NZH6 218 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 CWC15Q9P013 229 aaKnown RBP6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 HCSTQ9UBK5 93 aa6.37□□□□□ -1.39
TRAPPC1-204ENST00000571947 FBXW11Q9UKB1 542 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms