RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FASTKD1Q53R41 847 aaKnown RBP18.07■□□□□ 0.48
SCARF1-205ENST00000571272 IER5Q5VY09 327 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 MAP1SQ66K74 1059 aaPredicted RBP18.07■□□□□ 0.48
SCARF1-205ENST00000571272 RAPH1Q70E73 1250 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 MFN1Q8IWA4 741 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 MAP7D3Q8IWC1 876 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 SIGLEC10Q96LC7 697 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 RPF1Q9H9Y2 349 aaKnown RBP18.07■□□□□ 0.48
SCARF1-205ENST00000571272 DNAJC16Q9Y2G8 782 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 CRHR1P34998 444 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 PDE1BQ01064 536 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 LY6KQ17RY6 165 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 RALGPS1Q5JS13 557 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 GSDMBQ8TAX9 411 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 USP6NLQ92738 828 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 PIH1D1Q9NWS0 290 aaKnown RBP18.07■□□□□ 0.48
SCARF1-205ENST00000571272 MYO18AQ92614 2054 aaKnown RBP18.07■□□□□ 0.48
SCARF1-205ENST00000571272 MGAMO43451 1857 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 A0A088AWK7 358 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 SDR42E2A6NKP2 422 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 RAB27AP51159 221 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 EPHB1P54762 984 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 CCDC14Q49A88 953 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 FAM160B1Q5W0V3 765 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 ZNF534Q76KX8 674 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 C12orf29Q8N999 325 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 ZNF778Q96MU6 729 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 TRAPPC9Q96Q05 1148 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 MAGEB5Q9BZ81 275 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 PCDH18Q9HCL0 1135 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 THAP1Q9NVV9 213 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 SOX13Q9UN79 622 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 PARP14Q460N5 1801 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 CYP3A5P20815 502 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 ADORA2AP29274 412 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 CPOXP36551 454 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 CRADDP78560 199 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 HIC1Q14526 733 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 DENND5BQ6ZUT9 1274 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 HIPK4Q8NE63 616 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 CCDC124Q96CT7 223 aaKnown RBP18.06■□□□□ 0.48
SCARF1-205ENST00000571272 EBNA1BP2Q99848 306 aaKnown RBP18.06■□□□□ 0.48
SCARF1-205ENST00000571272 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 AS3MTQ9HBK9 375 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 DDX43Q9NXZ2 648 aaKnown RBP18.06■□□□□ 0.48
SCARF1-205ENST00000571272 PDP2Q9P2J9 529 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 RLFQ13129 1914 aa18.06■□□□□ 0.48
SCARF1-205ENST00000571272 LACTBL1A8MY62 500 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 WASHC5Q12768 1159 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 GSTA3Q16772 222 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 JADE1Q6IE81 842 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 RSPH3Q86UC2 560 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 FAM172AQ8WUF8 416 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 PPP1R16BQ96T49 567 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 FRMD8Q9BZ67 464 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 ZCWPW1Q9H0M4 648 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 CDT1Q9H211 546 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 EBF3Q9H4W6 596 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 CYP4F11Q9HBI6 524 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 PTPRHQ9HD43 1115 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 CPSF2Q9P2I0 782 aaKnown RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 HACL1Q9UJ83 578 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 FAM159BA6NKW6 160 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 SPDYE16A6NNV3 312 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 PDE5AO76074 875 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 GBE1Q04446 702 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 MXD4Q14582 209 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 CASC4Q6P4E1 433 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 CATSPERGQ6ZRH7 1159 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 TSHZ1Q6ZSZ6 1077 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 WDR75Q8IWA0 830 aaKnown RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 EFCAB3Q8N7B9 438 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 SEPT1Q8WYJ6 367 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 RTP4Q96DX8 246 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 NR1H4Q96RI1 486 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 SNRNP25Q9BV90 132 aaKnown RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 TSPAN16Q9UKR8 245 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 BCLAF3A2AJT9 711 aaKnown RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 ACKR2O00590 384 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 PROZP22891 400 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 CRABP2P29373 138 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 HSPA1LP34931 641 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 PIWIL2Q8TC59 973 aaKnown RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 SLC26A7Q8TE54 656 aa18.05■□□□□ 0.48
SCARF1-205ENST00000571272 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
SCARF1-205ENST00000571272 PHIPQ8WWQ0 1821 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 E2F8A0AVK6 867 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 GPR25O00155 361 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 RNASEH1O60930 286 aaKnown RBP18.04■□□□□ 0.48
SCARF1-205ENST00000571272 GSRP00390 522 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 DPEP1P16444 411 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 GMPRP36959 345 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 NDST1P52848 882 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 CFAP157Q5JU67 520 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 N4BP2L1Q5TBK1 243 aaPredicted RBP18.04■□□□□ 0.48
SCARF1-205ENST00000571272 RASIP1Q5U651 963 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 MKS1Q9NXB0 559 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 BIRC5O15392 142 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 IQCF3P0C7M6 154 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms