RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 GBP6Q6ZN66 633 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 RSRC2Q7L4I2 434 aaKnown RBP5.66□□□□□ -1.5
CHD3-212ENST00000570758 CACNA2D4Q7Z3S7 1137 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.66□□□□□ -1.5
CHD3-212ENST00000570758 TADA2BQ86TJ2 420 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 RASSF3Q86WH2 238 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 DENND1CQ8IV53 801 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 FMNL3Q8IVF7 1028 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 FAM217AQ8IXS0 508 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 SIX6OS1Q8N1H7 587 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 SCML4Q8N228 414 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 CAMKK1Q8N5S9 505 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 TERB1Q8NA31 727 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 TSTD1Q8NFU3 115 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 RNF139Q8WU17 664 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 IPO9Q96P70 1041 aaKnown RBP5.66□□□□□ -1.5
CHD3-212ENST00000570758 CDK5RAP1Q96SZ6 601 aaKnown RBP5.66□□□□□ -1.5
CHD3-212ENST00000570758 ACOX2Q99424 681 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 TPSD1Q9BZJ3 242 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 DCLK3Q9C098 648 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 DUSP15Q9H1R2 295 aaPredicted RBP5.66□□□□□ -1.5
CHD3-212ENST00000570758 THAP9Q9H5L6 903 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 CNGB3Q9NQW8 809 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 WDR35Q9P2L0 1181 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 DEC1Q9P2X7 70 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 EBF1Q9UH73 591 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 CYTH4Q9UIA0 394 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 FBXO10Q9UK96 956 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 STRIP2Q9ULQ0 834 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.66□□□□□ -1.5
CHD3-212ENST00000570758 MYO15AQ9UKN7 3530 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 EML5Q05BV3 1969 aa5.66□□□□□ -1.5
CHD3-212ENST00000570758 GOLGA6L7A0A1B0GV03 622 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 A0A1W2PQF6 199 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 GTPBP10A4D1E9 387 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 THAP12O43422 761 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 TSPAN3O60637 253 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 LETM1O95202 739 aaPredicted RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 EPN2O95208 641 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 IGLV3-27P01718 113 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 LTFP02788 710 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 PNMA6AP0CW24 399 aaPredicted RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 BCKDHBP21953 392 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ERCC5P28715 1186 aaPredicted RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 USP8P40818 1118 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 GPD2P43304 727 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 RPL34P49207 117 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 DGKGP49619 791 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 SGSHP51688 502 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 MFAP3P55082 362 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 CCDC6Q16204 474 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 MAN2A1Q16706 1144 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 EXOC3L4Q17RC7 722 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 GEN1Q17RS7 908 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 RSPO4Q2I0M5 234 aaPredicted RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 PLK5Q496M5 336 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 HSF5Q4G112 596 aaPredicted RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 VWA3BQ502W6 1294 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 EOGTQ5NDL2 527 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ENOSF1Q7L5Y1 443 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 CPXM2Q8N436 756 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 WDTC1Q8N5D0 677 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 FRMD1Q8N878 549 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ZNF513Q8N8E2 541 aaPredicted RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 MDGA1Q8NFP4 955 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 CCDC26Q8TAB7 109 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 OLIG1Q8TAK6 271 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ZNF606Q8WXB4 792 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 RLN3Q8WXF3 142 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 IRGQQ8WZA9 623 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 SHC3Q92529 594 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 PLD4Q96BZ4 506 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ERLEC1Q96DZ1 483 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 PIWIL1Q96J94 861 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 ZC3H10Q96K80 434 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 HSFY1Q96LI6 401 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 XPO6Q96QU8 1125 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 TUBGCP2Q9BSJ2 902 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 SLC4A5Q9BY07 1137 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 MIS12Q9H081 205 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ARRDC1-AS1Q9H2J1 176 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 SMOC1Q9H4F8 434 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 CD248Q9HCU0 757 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ABCC13Q9NSE7 274 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 SAMSN1Q9NSI8 373 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 OLA1Q9NTK5 396 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 SEMA4GQ9NTN9 838 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 APEX2Q9UBZ4 518 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 TJP2Q9UDY2 1190 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 DNAJC12Q9UKB3 198 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 CLEC4EQ9ULY5 219 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 USP18Q9UMW8 372 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 ZNF510Q9Y2H8 683 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 STARD13Q9Y3M8 1113 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 HBS1LQ9Y450 684 aaKnown RBP5.65□□□□□ -1.5
CHD3-212ENST00000570758 RAD54BQ9Y620 910 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 USP34Q70CQ2 3546 aa5.65□□□□□ -1.5
CHD3-212ENST00000570758 EP300Q09472 2414 aaPredicted RBP5.65□□□□□ -1.51
CHD3-212ENST00000570758 GVINP1Q7Z2Y8 2422 aa5.65□□□□□ -1.51
CHD3-212ENST00000570758 TCRBV21S2A2A0A5A6 115 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms