RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	MRPL10	Q7Z7H8	261 aa	Known RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	ANKRD13B	Q86YJ7	626 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	NGDN	Q8NEJ9	315 aa	Known RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	SUN3	Q8TAQ9	357 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	PIGO	Q8TEQ8	1089 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	IPCEF1	Q8WWN9	437 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	HIC2	Q96JB3	615 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	FCRL5	Q96RD9	977 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	TMEM79	Q9BSE2	394 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	BTBD1	Q9H0C5	482 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	NUP62CL	Q9H1M0	184 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	PNPLA8	Q9NP80	782 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	PRDM11	Q9NQV5	511 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	GAR1	Q9NY12	217 aa	Known RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	HEMK1	Q9Y5R4	338 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	ZMYM2	Q9UBW7	1377 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001		H3BNX3	289 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	THAP12	O43422	761 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	CBFA2T3	O75081	653 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	NDST3	O95803	873 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	PLAU	P00749	431 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	MYL3	P08590	195 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	ALAD	P13716	330 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	SLC5A1	P13866	664 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	TSHR	P16473	764 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	HOXA7	P31268	230 aa	Predicted RBP	3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	PRIM2	P49643	509 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	FOXG1	P55316	489 aa	Predicted RBP	3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	MTA1	Q13330	715 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	MTX1	Q13505	466 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	DNASE1L3	Q13609	305 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	LAMB3	Q13751	1172 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	CLCA4	Q14CN2	919 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	ACOX1	Q15067	660 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	LEXM	Q3ZCV2	418 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	C4orf46	Q504U0	113 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	ARHGAP15	Q53QZ3	475 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	TMEM196	Q5HYL7	178 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	MZT2A	Q6P582	158 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	ANKRD13A	Q8IZ07	590 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	RNF152	Q8N8N0	203 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	PIGK	Q92643	395 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	ZDHHC12	Q96GR4	267 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	VCPIP1	Q96JH7	1222 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	CAMK1G	Q96NX5	476 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	TBCB	Q99426	244 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	CINP	Q9BW66	212 aa	Predicted RBP	3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	UNK	Q9C0B0	810 aa	Known RBP	3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	EBF3	Q9H4W6	596 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	ABHD10	Q9NUJ1	306 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	ASNSD1	Q9NWL6	643 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001	SQOR	Q9Y6N5	450 aa		3.55	□□□□□ -1.84
BBS4-215	ENST00000569001		M0QZQ0	153 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	PRY	O14603	147 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	APAF1	O14727	1248 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	IKBKB	O14920	756 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	KCNAB3	O43448	404 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	SNHG28	P0DPA3	235 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	PEPD	P12955	493 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	PECAM1	P16284	738 aa	Predicted RBP	3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	TNFRSF1B	P20333	461 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	FGFR2	P21802	821 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	MST1	P26927	711 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	RPS13	P62277	151 aa	Known RBP	3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	ODF3L2	Q3SX64	289 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	ANO7	Q6IWH7	933 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	KYAT3	Q6YP21	454 aa	Known RBP	3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	COLCA1	Q6ZS62	124 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	DGKH	Q86XP1	1220 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	CCDC28A	Q8IWP9	274 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	KRT78	Q8N1N4	520 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	SDR16C5	Q8N3Y7	309 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	ATP11C	Q8NB49	1132 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	DDX21	Q9NR30	783 aa	Known RBP eCLIP	3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	ZBTB40	Q9NUA8	1239 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	TMEM45A	Q9NWC5	275 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	COG5	Q9UP83	839 aa		3.54	□□□□□ -1.84
BBS4-215	ENST00000569001	TTBK1	Q5TCY1	1321 aa	Predicted RBP	3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	MYMK	A6NI61	221 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	CD8B2	A6NJW9	211 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	ZSCAN9	O15535	394 aa	Predicted RBP	3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	NCK2	O43639	380 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	UGDH	O60701	494 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	COQ9	O75208	318 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	SCP2	P22307	547 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	STT3A	P46977	705 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	ME1	P48163	572 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	CASP5	P51878	434 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	PMS2P11	Q13670	270 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	KCNJ12	Q14500	433 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	ELF2	Q15723	593 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	CNGA3	Q16281	694 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	FAM110C	Q1W6H9	321 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	P3H1	Q32P28	736 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	COBLL1	Q53SF7	1204 aa		3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	EARS2	Q5JPH6	523 aa	Known RBP	3.53	□□□□□ -1.84
BBS4-215	ENST00000569001	FAXC	Q5TGI0	409 aa		3.53	□□□□□ -1.84

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