RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 TCF15Q12870 199 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 GAS6Q14393 721 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 TMEM196Q5HYL7 178 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 LY6G5CQ5SRR4 150 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 OTUD1Q5VV17 481 aaPredicted RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 SYPL2Q5VXT5 272 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 TAC4Q86UU9 113 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 C12orf40Q86WS4 652 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 ETFBKMTQ8IXQ9 262 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 FAM217AQ8IXS0 508 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 PHTF2Q8N3S3 785 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 DTWD2Q8NBA8 298 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 TMEM35BQ8NCS4 154 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 PLD4Q96BZ4 506 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 NOX5Q96PH1 765 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 SLC2A13Q96QE2 648 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 NELL2Q99435 816 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 CHRDQ9H2X0 955 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 RBM12Q9NTZ6 932 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 ASNSD1Q9NWL6 643 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 MARK1Q9P0L2 795 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 AGO1Q9UL18 857 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 MYO6Q9UM54 1294 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 MRPS17Q9Y2R5 130 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 HBS1LQ9Y450 684 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 USP34Q70CQ2 3546 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 CACNA1IQ9P0X4 2223 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 LRRC53A6NM62 1247 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 GFRA2O00451 464 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 HOXC11O43248 304 aaPredicted RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 HSF2BPO75031 334 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 GLI1P08151 1106 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 ADH5P11766 374 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 UNGP13051 313 aaPredicted RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 NCAM1P13591 858 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 CORO1AP31146 461 aaKnown RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 GALK1P51570 392 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 UBASH3AP57075 661 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 YWHAZP63104 245 aaKnown RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 SLC6A3Q01959 620 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 ARID5AQ03989 594 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 GOLGA8FQ08AF8 430 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 GOLGA8DPQ0D2H9 430 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 EIF4EBP2Q13542 120 aaPredicted RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 C2CD6Q53TS8 623 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 FIGNQ5HY92 759 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 NAA35Q5VZE5 725 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 Q6ZS52 159 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 SLC26A9Q7LBE3 791 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 CACNA2D4Q7Z3S7 1137 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 IRF2BP2Q7Z5L9 587 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 XYLT1Q86Y38 959 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 TMEM25Q86YD3 366 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 MAML2Q8IZL2 1156 aaPredicted RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 RNF214Q8ND24 703 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 ZNF397Q8NF99 534 aaPredicted RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 RNF139Q8WU17 664 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 FAM149B1Q96BN6 582 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 SLC39A13Q96H72 371 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 FCRL2Q96LA5 508 aaPredicted RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 P2RY13Q9BPV8 354 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 LMAN1LQ9HAT1 526 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 POPDC2Q9HBU9 364 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 SPHK2Q9NRA0 654 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 IFNKQ9P0W0 207 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 STOML2Q9UJZ1 356 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 LSM7Q9UK45 103 aaKnown RBP10.23□□□□□ -0.77
CLK3-220ENST00000567992 STRIP2Q9ULQ0 834 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 HCN4Q9Y3Q4 1203 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 CEP83Q9Y592 693 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 FRYLO94915 3013 aa10.23□□□□□ -0.77
CLK3-220ENST00000567992 ANTXRLA6NF34 631 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 IRAK2O43187 625 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 DAB1O75553 588 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 GRAP2O75791 330 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 ADH1CP00326 375 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 EGFP01133 1207 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 FERP16591 822 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 MMP8P22894 467 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 SCNN1AP37088 669 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 MAGEA9P43362 315 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 SLC6A11P48066 632 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 CENPCQ03188 943 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 PTP4A2Q12974 167 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 MTAPQ13126 283 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 NNTQ13423 1086 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 CLEC16AQ2KHT3 1053 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 DGKKQ5KSL6 1271 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 OR6B2Q6IFH4 312 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 TRNP1Q6NT89 227 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 PKN3Q6P5Z2 889 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 ZDHHC17Q8IUH5 632 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 DENND1CQ8IV53 801 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 SFTPA1Q8IWL2 248 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 DEFB106AQ8N104 65 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 ADAM32Q8TC27 787 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 IPO4Q8TEX9 1081 aaKnown RBP10.22□□□□□ -0.77
CLK3-220ENST00000567992 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
CLK3-220ENST00000567992 GOLGA1Q92805 767 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms