RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 CHPFQ8IZ52 775 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 PPM1KQ8N3J5 372 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 UBR7Q8N806 425 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 PIGKQ92643 395 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 SLC6A17Q9H1V8 727 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 METTL14Q9HCE5 456 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 VPS45Q9NRW7 570 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 CACNA2D2Q9NY47 1150 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 CLIC5Q9NZA1 410 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 MARCH2Q9P0N8 246 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 RAD54BQ9Y620 910 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 ACACBO00763 2458 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 BCLAF3A2AJT9 711 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 O00370 1275 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 CACNG3O60359 315 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 TSPAN3O60637 253 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 CISD3P0C7P0 127 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 VDRP11473 427 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 BRD2P25440 801 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 NTSR1P30989 418 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 PTGER3P43115 390 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 BCAT1P54687 386 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 YWHAEP62258 255 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 COG7P83436 770 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 CAMK4Q16566 473 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 STPG1Q5TH74 334 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 PMS2CLQ68D20 193 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 KIAA1211LQ6NV74 962 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 NUDT18Q6ZVK8 323 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 BHLHA9Q7RTU4 235 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 ARHGEF19Q8IW93 802 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 OLIG1Q8TAK6 271 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 FAXDC2Q96IV6 333 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 ZSWIM1Q9BR11 485 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 SRRTQ9BXP5 876 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 MARK1Q9P0L2 795 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 SFMBT1Q9UHJ3 866 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 MBD1Q9UIS9 605 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 AGO1Q9UL18 857 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 STRIP2Q9ULQ0 834 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 CLEC4EQ9ULY5 219 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 PCDHGA5Q9Y5G8 931 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 ATXN2Q99700 1313 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
GTF3C1-208ENST00000567843 YJEFN3A6XGL0 299 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 E7ENQ6 273 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 MSI1O43347 362 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 GABBR2O75899 941 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 GABRG2P18507 467 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 TBXAS1P24557 533 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 P2RY2P41231 377 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 BST2Q10589 180 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 MAP7D1Q3KQU3 841 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 HSF5Q4G112 596 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 PREPLQ4J6C6 727 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 FYB2Q5VWT5 728 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 RNF43Q68DV7 783 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 FMNL3Q8IVF7 1028 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 SIX6OS1Q8N1H7 587 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 ARHGAP18Q8N392 663 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 RNF139Q8WU17 664 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 CDK5RAP1Q96SZ6 601 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 CD93Q9NPY3 652 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 CALCOCO1Q9P1Z2 691 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 CHD8Q9HCK8 2581 aa12.8□□□□□ -0.36
GTF3C1-208ENST00000567843 A0A1W2PQF6 199 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 C4orf47A7E2U8 309 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 M0QYV0 167 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 FOXD2O60548 495 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 KCNH2Q12809 1159 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 PAK1Q13153 545 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 BSPRYQ5W0U4 402 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 PM20D1Q6GTS8 502 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 SDE2Q6IQ49 451 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 PMF1Q6P1K2 205 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 LPCAT2Q7L5N7 544 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 TRMT11Q7Z4G4 463 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 TRIM59Q8IWR1 403 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 ELOA2Q8IYF1 753 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 RBBP8NLQ8NC74 664 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 EHBP1Q8NDI1 1231 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 LMO3Q8TAP4 145 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 CLEC4CQ8WTT0 213 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 DDI1Q8WTU0 396 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 SPACA7Q96KW9 195 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 EDEM2Q9BV94 578 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 DCLK3Q9C098 648 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 MIS12Q9H081 205 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 CYP8B1Q9UNU6 501 aa12.79□□□□□ -0.36
GTF3C1-208ENST00000567843 STARD13Q9Y3M8 1113 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms