RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 GATMP50440 423 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 RNASE9P60153 205 aaKnown RBP6.4□□□□□ -1.38
KARS-208ENST00000566772 ROR1Q01973 937 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 MYBPC2Q14324 1141 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 PRICKLE4Q2TBC4 344 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 ZNF569Q5MCW4 686 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 ARHGAP40Q5TG30 622 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 RINLQ6ZS11 566 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 PXKQ7Z7A4 578 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 RALYLQ86SE5 291 aaKnown RBP6.4□□□□□ -1.38
KARS-208ENST00000566772 GPR135Q8IZ08 494 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 LRRC71Q8N4P6 559 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 C11orf44Q8N8P7 122 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 ZNF483Q8TF39 744 aaPredicted RBP6.4□□□□□ -1.38
KARS-208ENST00000566772 SLC22A17Q8WUG5 538 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 MBD6Q96DN6 1003 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 SLF1Q9BQI6 1058 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 HERC2P3Q9BVR0 1158 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 PLA2G3Q9NZ20 509 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 TBC1D14Q9P2M4 693 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 HSFX1Q9UBD0 423 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 CNOT7Q9UIV1 285 aaKnown RBP6.4□□□□□ -1.38
KARS-208ENST00000566772 NFU1Q9UMS0 254 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 SMG5Q9UPR3 1016 aaKnown RBP6.4□□□□□ -1.38
KARS-208ENST00000566772 RCE1Q9Y256 329 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 SLC27A6Q9Y2P4 619 aa6.4□□□□□ -1.38
KARS-208ENST00000566772 MLH3Q9UHC1 1453 aa6.4□□□□□ -1.39
KARS-208ENST00000566772 CCDC195A0A1B0GUA6 201 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 PMS2P1A4D2B8 440 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 M0QYT0 321 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 TNPO2O14787 897 aaKnown RBP6.39□□□□□ -1.39
KARS-208ENST00000566772 GJB3O75712 270 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 UBL4AP11441 157 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 GCSHP23434 173 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 ITGB7P26010 798 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 ADORA2AP29274 412 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 PRKAR1BP31321 381 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 HTR7P34969 479 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 MC2RQ01718 297 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 MPP3Q13368 585 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 MAMLD1Q13495 774 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 CCNIQ14094 377 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 DCTN1Q14203 1278 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 BECN1Q14457 450 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 TBCCQ15814 346 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 TMEM196Q5HYL7 178 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 CBWD5Q5RIA9 395 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 RGS7BPQ6MZT1 257 aaPredicted RBP6.39□□□□□ -1.39
KARS-208ENST00000566772 SLC22A25Q6T423 547 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 PIK3AP1Q6ZUJ8 805 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 FSTL5Q8N475 847 aaPredicted RBP6.39□□□□□ -1.39
KARS-208ENST00000566772 ANKRD44Q8N8A2 993 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 FSIP1Q8NA03 581 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 HAPLN3Q96S86 360 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 ARHGAP39Q9C0H5 1083 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 SLC25A18Q9H1K4 315 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 C12orf65Q9H3J6 166 aaKnown RBP6.39□□□□□ -1.39
KARS-208ENST00000566772 BRF2Q9HAW0 419 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 MRGBPQ9NV56 204 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 ZDHHC7Q9NXF8 308 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 NTMQ9P121 344 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 CTTNBP2NLQ9P2B4 639 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 BAG5Q9UL15 447 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 PCDHGB4Q9UN71 923 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 ZBTB1Q9Y2K1 713 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 PTPRTO14522 1441 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 NCOA1Q15788 1441 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 CNTLNQ9NXG0 1405 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 AGLP35573 1532 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 SAMD9LQ8IVG5 1584 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 LTBP4Q8N2S1 1624 aa6.39□□□□□ -1.39
KARS-208ENST00000566772 GTPBP1O00178 669 aaKnown RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 SEPT4O43236 478 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 HEXIM1O94992 359 aaKnown RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 CLEC3BP05452 202 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 ADRB2P07550 413 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 RBL1P28749 1068 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 EPHA8P29322 1005 aaPredicted RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 ARL3P36405 182 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 PBX1P40424 430 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 HARS2P49590 506 aaKnown RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 FAM3BP58499 235 aaPredicted RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 IFI35P80217 286 aaPredicted RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 CREB5Q02930 508 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 DCTN2Q13561 401 aaKnown RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 CAMK1Q14012 370 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 E2F2Q14209 437 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 WTAPQ15007 396 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 TBRG1Q3YBR2 411 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 LIPMQ5VYY2 423 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 NAA35Q5VZE5 725 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 DRICH1Q6PGQ1 229 aaPredicted RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.38□□□□□ -1.39
KARS-208ENST00000566772 PRR23BQ6ZRT6 265 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 SYT12Q8IV01 421 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 RHOT2Q8IXI1 618 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 SLC15A3Q8IY34 581 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 CCDC191Q8NCU4 936 aa6.38□□□□□ -1.39
KARS-208ENST00000566772 USP6NLQ92738 828 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms