RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 A0A1W2PQF6 199 aa29.04■■■□□ 2.24
UBFD1-206ENST00000566669 PENKP01210 267 aaPredicted RBP29.04■■■□□ 2.24
UBFD1-206ENST00000566669 RPL6Q02878 288 aaKnown RBP29.04■■■□□ 2.24
UBFD1-206ENST00000566669 EGFLAMQ63HQ2 1017 aa29.04■■■□□ 2.24
UBFD1-206ENST00000566669 RSRC2Q7L4I2 434 aaKnown RBP29.04■■■□□ 2.24
UBFD1-206ENST00000566669 UCMAQ8WVF2 138 aa29.04■■■□□ 2.24
UBFD1-206ENST00000566669 CALCOCO1Q9P1Z2 691 aa29.04■■■□□ 2.24
UBFD1-206ENST00000566669 PILRBQ9UKJ0 227 aa29.04■■■□□ 2.24
UBFD1-206ENST00000566669 CDX4O14627 284 aaPredicted RBP29.03■■■□□ 2.24
UBFD1-206ENST00000566669 CISD3P0C7P0 127 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 PPP1R2P41236 205 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 PTGER3P43115 390 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 BCAT1P54687 386 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 STARD3Q14849 445 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 ST3GAL2Q16842 350 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 DUOXA1Q1HG43 343 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 TCERG1LQ5VWI1 586 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 PIGZQ86VD9 579 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 ZC3H3Q8IXZ2 948 aaKnown RBP29.03■■■□□ 2.24
UBFD1-206ENST00000566669 FMR1NBQ8N0W7 255 aaPredicted RBP29.03■■■□□ 2.24
UBFD1-206ENST00000566669 ZDHHC4Q9NPG8 344 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 MARCH2Q9P0N8 246 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 HESX1Q9UBX0 185 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 RASAL2Q9UJF2 1139 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 NUDT5Q9UKK9 219 aa29.03■■■□□ 2.24
UBFD1-206ENST00000566669 MYO18AQ92614 2054 aaKnown RBP29.02■■■□□ 2.24
UBFD1-206ENST00000566669 PRRT4C9JH25 899 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 MDM4O15151 490 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 TRIM24O15164 1050 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 TBXAS1P24557 533 aaPredicted RBP29.02■■■□□ 2.24
UBFD1-206ENST00000566669 PRCPP42785 496 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 ZNF445P59923 1031 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 YWHAGP61981 247 aaKnown RBP eCLIP29.02■■■□□ 2.24
UBFD1-206ENST00000566669 EFEMP1Q12805 493 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 STIM1Q13586 685 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 PM20D1Q6GTS8 502 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 CPXM2Q8N436 756 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 PLD4Q96BZ4 506 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 SLC2A11Q9BYW1 496 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 METTL14Q9HCE5 456 aaKnown RBP29.02■■■□□ 2.24
UBFD1-206ENST00000566669 ARMCX3Q9UH62 379 aaPredicted RBP29.02■■■□□ 2.24
UBFD1-206ENST00000566669 HCN2Q9UL51 889 aa29.02■■■□□ 2.24
UBFD1-206ENST00000566669 KMT2BQ9UMN6 2715 aaPredicted RBP29.01■■■□□ 2.24
UBFD1-206ENST00000566669 PATE3B3GLJ2 98 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 XPO1O14980 1071 aaKnown RBP29.01■■■□□ 2.23
UBFD1-206ENST00000566669 ZBED1O96006 694 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 PNOCQ13519 176 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 CUL2Q13617 745 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 EIF4HQ15056 248 aaKnown RBP29.01■■■□□ 2.23
UBFD1-206ENST00000566669 SGO2Q562F6 1265 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 DCAF17Q5H9S7 520 aaPredicted RBP29.01■■■□□ 2.23
UBFD1-206ENST00000566669 METTL3Q86U44 580 aaKnown RBP29.01■■■□□ 2.23
UBFD1-206ENST00000566669 SMYD4Q8IYR2 804 aaPredicted RBP29.01■■■□□ 2.23
UBFD1-206ENST00000566669 TIGD1Q96MW7 591 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 SLC32A1Q9H598 525 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 CD248Q9HCU0 757 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 SLC6A14Q9UN76 642 aa29.01■■■□□ 2.23
UBFD1-206ENST00000566669 NDUFV2P19404 249 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 CORO1AP31146 461 aaKnown RBP29■■■□□ 2.23
UBFD1-206ENST00000566669 TKTL1P51854 596 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 ATXN3P54252 364 aaPredicted RBP29■■■□□ 2.23
UBFD1-206ENST00000566669 GFPT1Q06210 699 aaPredicted RBP29■■■□□ 2.23
UBFD1-206ENST00000566669 ZNF33AQ06730 810 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 SH3PXD2AQ5TCZ1 1133 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 TOGARAM2Q6ZUX3 1019 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 SPATA20Q8TB22 786 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 FOXJ1Q92949 421 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 SMARCE1Q969G3 411 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 LRRC4Q9HBW1 653 aa29■■■□□ 2.23
UBFD1-206ENST00000566669 CEP295Q9C0D2 2601 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 IGHV1OR15-9A0A0B4J2B8 117 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 UPK3BL1B0FP48 263 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 UPK3BL2E5RIL1 263 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 TIMM44O43615 452 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 KLKB1P03952 638 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 SERPINF2P08697 491 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 WASP42768 502 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 BST2Q10589 180 aaKnown RBP28.99■■■□□ 2.23
UBFD1-206ENST00000566669 BECN1Q14457 450 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 SYCP2LQ5T4T6 812 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 FYB2Q5VWT5 728 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 ARMCX6Q7L4S7 300 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 FRMD1Q8N878 549 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 EEF2KMTQ96G04 330 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 IPO9Q96P70 1041 aaKnown RBP28.99■■■□□ 2.23
UBFD1-206ENST00000566669 ARID3AQ99856 593 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 GDPD2Q9HCC8 539 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 TMEM74BQ9NUR3 256 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 SUSD2Q9UGT4 822 aa28.99■■■□□ 2.23
UBFD1-206ENST00000566669 AGO1Q9UL18 857 aaKnown RBP28.99■■■□□ 2.23
UBFD1-206ENST00000566669 PSMA7O14818 248 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 NDUFS2O75306 463 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 SETSIPP0DME0 302 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 ENGP17813 658 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 ITPKAP23677 461 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 HARS2P49590 506 aaKnown RBP28.98■■■□□ 2.23
UBFD1-206ENST00000566669 NUCB2P80303 420 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 CETN1Q12798 172 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 CBWD6Q4V339 395 aa28.98■■■□□ 2.23
UBFD1-206ENST00000566669 CBWD3Q5JTY5 395 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms