RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 SLC6A11P48066 632 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 GAD2Q05329 585 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 TRIP4Q15650 581 aaPredicted RBP13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 ANO4Q32M45 955 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 PTPN20Q4JDL3 420 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 SYNPOQ8N3V7 929 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 FAM122AQ96E09 287 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 PIWIL1Q96J94 861 aaKnown RBP13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 NOX5Q96PH1 765 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 PDCL3Q9H2J4 239 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 PRMT8Q9NR22 394 aaPredicted RBP13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 AGO1Q9UL18 857 aaKnown RBP13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 ZNF510Q9Y2H8 683 aa13.46□□□□□ -0.25
CNEP1R1-208ENST00000566482 ERBB2P04626 1255 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 MMEP08473 750 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 CDH5P33151 784 aaPredicted RBP13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 EIF2DP41214 584 aaKnown RBP13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 STAT1P42224 750 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 TPM4P67936 248 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 SATB1Q01826 763 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 CSTF1Q05048 431 aaKnown RBP13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 KDSRQ06136 332 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 MESP2Q0VG99 397 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 FILIP1LQ4L180 1135 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 PKN3Q6P5Z2 889 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 TPGS1Q6ZTW0 290 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 DENND1CQ8IV53 801 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 ETFBKMTQ8IXQ9 262 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 SPEM1Q8N4L4 309 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 NAT16Q8N8M0 369 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 TMEM35BQ8NCS4 154 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 DQX1Q8TE96 717 aaKnown RBP13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 PNKPQ96T60 521 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 PHOX2BQ99453 314 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 TRIM62Q9BVG3 475 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 BBS2Q9BXC9 721 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 NOCTQ9UK39 431 aaKnown RBP13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 FBXO4Q9UKT5 387 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 NAALADL1Q9UQQ1 740 aa13.45□□□□□ -0.26
CNEP1R1-208ENST00000566482 MYOFQ9NZM1 2061 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 FAM170AA1A519 330 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 NEDD8-MDP1E9PL57 170 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 RNF40O75150 1001 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 LSM8O95777 96 aaKnown RBP13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 CAVIN2O95810 425 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 SERPINC1P01008 464 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 IGLV3-27P01718 113 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 TYRP14679 529 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 HARS2P49590 506 aaKnown RBP13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 CCR3P51677 355 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 TAF5Q15542 800 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 FBXO43Q4G163 708 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 SYPL2Q5VXT5 272 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 OR6B2Q6IFH4 312 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 TSSK4Q6SA08 328 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 FAM183BPQ6ZVS7 135 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 BEND5Q7L4P6 421 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 TAC4Q86UU9 113 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 ZNF677Q86XU0 584 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 SFTPA1Q8IWL2 248 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 PHTF2Q8N3S3 785 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 IPO4Q8TEX9 1081 aaKnown RBP13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 BHMTQ93088 406 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 SYNCQ9H7C4 482 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 POPDC2Q9HBU9 364 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 ARHGEF4Q9NR80 690 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 C2orf42Q9NWW7 574 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 MARK1Q9P0L2 795 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
CNEP1R1-208ENST00000566482 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CACNA1IQ9P0X4 2223 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 K7EQS6 105 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CAPN9O14815 690 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CACNG3O60359 315 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 TULP3O75386 442 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 APODP05090 189 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CHRNB2P17787 502 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CHKAP35790 457 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CXCL12P48061 93 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 SEC13P55735 322 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 TBX4P57082 545 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 SNX16P57768 344 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 YWHAZP63104 245 aaKnown RBP13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 NOMO3P69849 1222 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 FANCCQ00597 558 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 FMO1Q01740 532 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CDR2Q01850 454 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 ARID5AQ03989 594 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 ZNF528Q3MIS6 628 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 EFHC1Q5JVL4 640 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 NAA35Q5VZE5 725 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 OLFML1Q6UWY5 402 aa13.43□□□□□ -0.26
CNEP1R1-208ENST00000566482 CACNA2D4Q7Z3S7 1137 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms