RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 MCF2LO15068 1137 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 BAIAP3O94812 1187 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 TIMP1P01033 207 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 CD48P09326 243 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 HSD17B3P37058 310 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 ARL4AP40617 200 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 CXCR3P49682 368 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 PLTPP55058 493 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 DEUP1Q05D60 604 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 SEMA3BQ13214 749 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 SNX1Q13596 522 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 MORF4L2Q15014 288 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 CDO1Q16878 200 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 ARL13BQ3SXY8 428 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 PAN2Q504Q3 1202 aaKnown RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 DCAF6Q58WW2 860 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 ACBD5Q5T8D3 534 aaPredicted RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 KAZNQ674X7 775 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 HIBCHQ6NVY1 386 aaPredicted RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 SCYL2Q6P3W7 929 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 TRMT10CQ7L0Y3 403 aaKnown RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 GPRIN1Q7Z2K8 1008 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 HOOK3Q86VS8 718 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 ZNF276Q8N554 614 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 PQLC3Q8N755 202 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 GOLGA6L1Q8N7Z2 621 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 PCDH19Q8TAB3 1148 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 HASPINQ8TF76 798 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 PIK3R5Q8WYR1 880 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 P3H4Q92791 437 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 TOP1MTQ969P6 601 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 HAUS1Q96CS2 278 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 ZNF689Q96CS4 500 aaPredicted RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 SPATA17Q96L03 361 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 CCDC114Q96M63 670 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 CALN1Q9BXU9 219 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 FBXO44Q9H4M3 255 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 WDR6Q9NNW5 1121 aaKnown RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 ABCC13Q9NSE7 274 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 TMEM39AQ9NV64 488 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 FBXW11Q9UKB1 542 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 MAFFQ9ULX9 164 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 SHOC2Q9UQ13 582 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 SCML2Q9UQR0 700 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 ZNF148Q9UQR1 794 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 PRG3Q9Y2Y8 225 aaPredicted RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 F8W810 466 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 H0YGN5 161 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 H3BQF6 201 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 H3BRJ5 948 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 M0QYT0 321 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CAPN9O14815 690 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 RTN3O95197 1032 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 SYF2O95926 243 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 USP17L7P0C7H9 530 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 RBP3P10745 1247 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 TFE3P19532 575 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CYP2F1P24903 491 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 ADRA1BP35368 520 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 ADCY8P40145 1251 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 MAGEA6P43360 314 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 SLC5A3P53794 718 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 PMS2P54278 862 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CCL23P55773 120 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 BCAR1P56945 870 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 EIF3EP60228 445 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 C1QTNF8P60827 252 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 NRG1Q02297 640 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 GABPB1Q06547 395 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 DHX9Q08211 1270 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 MTA1Q13330 715 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 UAP1Q16222 522 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CA9Q16790 459 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CTXN3Q4LDR2 81 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 SLC39A12Q504Y0 691 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 RAB6CQ53S08 254 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 ZC3H12AQ5D1E8 599 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 EFHC2Q5JST6 749 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 BRMS1LQ5PSV4 323 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 FAM171A1Q5VUB5 890 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 SYPL2Q5VXT5 272 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 BSPRYQ5W0U4 402 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 SLC8B1Q6J4K2 584 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 MSANTD2Q6P1R3 559 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 HFE2Q6ZVN8 426 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 MON1AQ86VX9 555 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CDKL3Q8IVW4 592 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CMTR2Q8IYT2 770 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 ZCCHC9Q8N567 271 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 DIS3LQ8TF46 1054 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 ACSF2Q96CM8 615 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 ZIM3Q96PE6 472 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CSPG4P5Q96PW8 444 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 KCTD15Q96SI1 283 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 TMEM209Q96SK2 561 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 RUFY1Q96T51 708 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 HINFPQ9BQA5 517 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 TTPALQ9BTX7 342 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms