RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ADM5C9JUS6 153 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 M0QX08 132 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 ADH1BP00325 375 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 TNFRSF8P28908 595 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 IFNAR2P48551 515 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 HARS2P49590 506 aaKnown RBP11.17□□□□□ -0.62
UBFD1-205ENST00000566136 SNAPC2Q13487 334 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 BBS9Q3SYG4 887 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 VN1R5Q7Z5H4 357 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 C4orf32Q8N8J7 132 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 IQUBQ8NA54 791 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 MNS1Q8NEH6 495 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 FBXO30Q8TB52 745 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 VAT1LQ9HCJ6 419 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 FBXL7Q9UJT9 491 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 HCN2Q9UL51 889 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 PCDHB1Q9Y5F3 818 aa11.17□□□□□ -0.62
UBFD1-205ENST00000566136 DDX60LQ5H9U9 1706 aaKnown RBP11.17□□□□□ -0.62
UBFD1-205ENST00000566136 KLRF2D3W0D1 207 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 PPM1BO75688 479 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TPOP07202 933 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 HEXBP07686 556 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 INHBAP08476 426 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 KELP23276 732 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 CHMP24386 653 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 RFC1P35251 1148 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
UBFD1-205ENST00000566136 PRKCIP41743 596 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 GNAQP50148 359 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 LBX1P52954 281 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 ADARP55265 1226 aaKnown RBP11.16□□□□□ -0.62
UBFD1-205ENST00000566136 DHX9Q08211 1270 aaKnown RBP11.16□□□□□ -0.62
UBFD1-205ENST00000566136 HFEQ30201 348 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 SPECC1LQ69YQ0 1117 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TMEM139Q8IV31 216 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 FAM71BQ8TC56 605 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 PERPQ96FX8 193 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 PDCD2LQ9BRP1 358 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 SACM1LQ9NTJ5 587 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TCP11L1Q9NUJ3 509 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 ACTR3BQ9P1U1 418 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-205ENST00000566136 DPP7Q9UHL4 492 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TMEM5Q9Y2B1 443 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 VILLO15195 856 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TGFB1I1O43294 461 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TSPAN3O60637 253 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 NFKB1P19838 968 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 AKT1P31749 480 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
UBFD1-205ENST00000566136 CNKSR3Q6P9H4 555 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 FBXO38Q6PIJ6 1188 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 TC2NQ8N9U0 490 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 ATP11CQ8NB49 1132 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 RASSF8Q8NHQ8 419 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 DCPSQ96C86 337 aaKnown RBP11.16□□□□□ -0.62
UBFD1-205ENST00000566136 KCNJ15Q99712 375 aa11.16□□□□□ -0.62
UBFD1-205ENST00000566136 MYH1P12882 1939 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 C2CD2LO14523 706 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 SLC25A17O43808 307 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 ADH1CP00326 375 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 CCNCP24863 283 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 HOXA11P31270 313 aaPredicted RBP11.15□□□□□ -0.62
UBFD1-205ENST00000566136 GPC3P51654 580 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 TRIM32Q13049 653 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 CHAF1BQ13112 559 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 LRRC14Q15048 493 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 CCDC178Q5BJE1 867 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 PLEKHM3Q6ZWE6 761 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 CLEC10AQ8IUN9 316 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 FBXO15Q8NCQ5 510 aaPredicted RBP11.15□□□□□ -0.62
UBFD1-205ENST00000566136 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 NEK11Q8NG66 645 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 DNAJB8Q8NHS0 232 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 BHMTQ93088 406 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 SLC6A16Q9GZN6 736 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 ZNHIT6Q9NWK9 470 aaKnown RBP11.15□□□□□ -0.62
UBFD1-205ENST00000566136 BARHL2Q9NY43 387 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 SAMM50Q9Y512 469 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 A0A1B0GTH6 734 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 HSPA8P11142 646 aaKnown RBP11.15□□□□□ -0.62
UBFD1-205ENST00000566136 RPS2P15880 293 aaKnown RBP11.15□□□□□ -0.62
UBFD1-205ENST00000566136 DNAJB1P25685 340 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 STAT6P42226 847 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 NAPAP54920 295 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 NR1I3Q14994 352 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 GBP6Q6ZN66 633 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 APTXQ7Z2E3 356 aaKnown RBP11.15□□□□□ -0.62
UBFD1-205ENST00000566136 CCDC148Q8NFR7 591 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 UIMC1Q96RL1 719 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 POFUT1Q9H488 388 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 SP110Q9HB58 689 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 DNAI1Q9UI46 699 aa11.15□□□□□ -0.62
UBFD1-205ENST00000566136 GDAQ9Y2T3 454 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms