RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ERLIN2O94905 339 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 EFEMP2O95967 443 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CST3P01034 146 aaPredicted RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 IGLV1-40P01703 118 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RHOP08100 348 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 USP17L7P0C7H9 530 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 PCSK2P16519 638 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CSRP1P21291 193 aaKnown RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 SFPQP23246 707 aaKnown RBP eCLIP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ITPKBP27987 946 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CDC25BP30305 580 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 GBP1P32455 592 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CD68P34810 354 aaPredicted RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CCR2P41597 374 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 MATR3P43243 847 aaKnown RBP eCLIP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 SCNN1GP51170 649 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CDR1P51861 262 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 KPNA1P52294 538 aaPredicted RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ZNF445P59923 1031 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 APBA1Q02410 837 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 PPP3CAQ08209 521 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 HYAL2Q12891 473 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 STRN3Q13033 797 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 NAB2Q15742 525 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ZBTB6Q15916 424 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ZNF568Q3ZCX4 644 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 GLRA4Q5JXX5 417 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CEP135Q66GS9 1140 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 SDE2Q6IQ49 451 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 FUT10Q6P4F1 479 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 NOTUMQ6P988 496 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 SLC27A1Q6PCB7 646 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ZPBP2Q6X784 338 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 EFCAB13Q8IY85 973 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RNF168Q8IYW5 571 aaPredicted RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 AOPEPQ8N6M6 819 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 MLKLQ8NB16 471 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RNF214Q8ND24 703 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CXorf38Q8TB03 319 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 HDAC7Q8WUI4 952 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 PIGKQ92643 395 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RSPRY1Q96DX4 576 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 LOXL4Q96JB6 756 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 FRMD6Q96NE9 622 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 NAP1L5Q96NT1 182 aaPredicted RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CORO1BQ9BR76 489 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 TMEM175Q9BSA9 504 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 MSTO1Q9BUK6 570 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RASSF4Q9H2L5 321 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 GOLGA2P5Q9HBQ8 144 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ZFP14Q9HCL3 533 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 NPHS2Q9NP85 383 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CHST7Q9NS84 486 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RMND1Q9NWS8 449 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 GTSE1Q9NYZ3 720 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 STOML1Q9UBI4 398 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 DPP7Q9UHL4 492 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 MBD1Q9UIS9 605 aaPredicted RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RWDD2AQ9UIY3 292 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 HOOK1Q9UJC3 728 aaKnown RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 FBXW11Q9UKB1 542 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 SSX2IPQ9Y2D8 614 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CABIN1Q9Y6J0 2220 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 TNRC6BQ9UPQ9 1833 aaKnown RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 DOCK9Q9BZ29 2069 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 SMIM28A0A1B0GU29 152 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 J3QKU1 62 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 ZNF263O14978 683 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 N4BP3O15049 544 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 OGTO15294 1046 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 TADA2AO75478 443 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 VNN1O95497 513 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 TGFB1P01137 390 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 NFICP08651 508 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 TRIM49P0CI25 452 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 TRIM49CP0CI26 452 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 MCF2P10911 925 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 ITGA4P13612 1032 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 BCKDHBP21953 392 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 GARTP22102 1010 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 NR2F2P24468 414 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 AXLP30530 894 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 OR1D2P34982 312 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 MLH1P40692 756 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 CYP24A1Q07973 514 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 CYP4F3Q08477 520 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 PAK1Q13153 545 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 NOLC1Q14978 699 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBFD1-204ENST00000565634 STX1AQ16623 288 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 UVSSAQ2YD98 709 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 USP41Q3LFD5 358 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 XKR4Q5GH76 650 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 LIN9Q5TKA1 542 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 SPATA1Q5VX52 437 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 JADE1Q6IE81 842 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 DPY19L2P1Q6NXN4 242 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 ARMCX5Q6P1M9 558 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 ARMCX6Q7L4S7 300 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 APTXQ7Z2E3 356 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms