RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 KCNH2Q12809 1159 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 BYSLQ13895 437 aaKnown RBP19.89■□□□□ 0.77
SPSB3-207ENST00000565550 TPD52L1Q16890 204 aaPredicted RBP19.89■□□□□ 0.77
SPSB3-207ENST00000565550 SASS6Q6UVJ0 657 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 THADAQ6YHU6 1953 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 CCDC150Q8NCX0 1101 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 XPO6Q96QU8 1125 aaKnown RBP19.89■□□□□ 0.77
SPSB3-207ENST00000565550 PNPLA8Q9NP80 782 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 TMEM9BQ9NQ34 198 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 SAMSN1Q9NSI8 373 aaKnown RBP19.89■□□□□ 0.77
SPSB3-207ENST00000565550 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.89■□□□□ 0.77
SPSB3-207ENST00000565550 WDR35Q9P2L0 1181 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 DNMT3LQ9UJW3 386 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 COQ4Q9Y3A0 265 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 STARD13Q9Y3M8 1113 aa19.89■□□□□ 0.77
SPSB3-207ENST00000565550 EPG5Q9HCE0 2579 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 HOXB2P14652 356 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 ERCC5P28715 1186 aaPredicted RBP19.88■□□□□ 0.77
SPSB3-207ENST00000565550 NTSR1P30989 418 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 KIF11P52732 1056 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 ST3GAL2Q16842 350 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 ZNF394Q53GI3 561 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 C10orf120Q5SQS8 335 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 PPP1R26Q5T8A7 1209 aaPredicted RBP19.88■□□□□ 0.77
SPSB3-207ENST00000565550 EGFLAMQ63HQ2 1017 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 KLHDC10Q6PID8 442 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 SCD5Q86SK9 330 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 ACOX2Q99424 681 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 DUSP16Q9BY84 665 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 TMEM74BQ9NUR3 256 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 MARK1Q9P0L2 795 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 DACH1Q9UI36 760 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 NAGPAQ9UK23 515 aa19.88■□□□□ 0.77
SPSB3-207ENST00000565550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.88■□□□□ 0.77
SPSB3-207ENST00000565550 MYO18AQ92614 2054 aaKnown RBP19.87■□□□□ 0.77
SPSB3-207ENST00000565550 PRRT4C9JH25 899 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 GIPC1O14908 333 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 CACNG3O60359 315 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 GNA14O95837 355 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 GABRG2P18507 467 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 NOVA1P51513 510 aaKnown RBP19.87■□□□□ 0.77
SPSB3-207ENST00000565550 TYRO3Q06418 890 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 STX1AQ16623 288 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 TRIM61Q5EBN2 209 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 TOGARAM2Q6ZUX3 1019 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 SYT12Q8IV01 421 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 LMO3Q8TAP4 145 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 HEXIM2Q96MH2 286 aaKnown RBP19.87■□□□□ 0.77
SPSB3-207ENST00000565550 DNAI2Q9GZS0 605 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 EVLQ9UI08 416 aaPredicted RBP19.87■□□□□ 0.77
SPSB3-207ENST00000565550 USP3Q9Y6I4 520 aa19.87■□□□□ 0.77
SPSB3-207ENST00000565550 NUP205Q92621 2012 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 A0A1W2PQF6 199 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 FGFR1OPO95684 399 aaKnown RBP19.86■□□□□ 0.77
SPSB3-207ENST00000565550 AFPP02771 609 aaKnown RBP19.86■□□□□ 0.77
SPSB3-207ENST00000565550 PSEN1P49768 467 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 SHC2P98077 582 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 APBA1Q02410 837 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 KLHL40Q2TBA0 621 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 SPDYCQ5MJ68 293 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 SH3PXD2AQ5TCZ1 1133 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 LYSMD4Q5XG99 296 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 SDE2Q6IQ49 451 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 Q6ZNB5 142 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 CCDC186Q7Z3E2 898 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 ARHGEF19Q8IW93 802 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 CHPFQ8IZ52 775 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 DEFB119Q8N690 84 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 KAT5Q92993 513 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 BHMTQ93088 406 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 ERLEC1Q96DZ1 483 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 THAP9Q9H5L6 903 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 CALCOCO1Q9P1Z2 691 aa19.86■□□□□ 0.77
SPSB3-207ENST00000565550 LAMA1P25391 3075 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 STC2O76061 302 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 CISD3P0C7P0 127 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 RALAP11233 206 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 MTIF2P46199 727 aaKnown RBP19.85■□□□□ 0.77
SPSB3-207ENST00000565550 DGKGP49619 791 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 UAP1L1Q3KQV9 507 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 TADA2BQ86TJ2 420 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 ZNF276Q8N554 614 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 NUSAP1Q9BXS6 441 aaKnown RBP19.85■□□□□ 0.77
SPSB3-207ENST00000565550 CISHQ9NSE2 258 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 ANO10Q9NW15 660 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 PLK2Q9NYY3 685 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 CLIC5Q9NZA1 410 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 NFE2L3Q9Y4A8 694 aa19.85■□□□□ 0.77
SPSB3-207ENST00000565550 ATXN2Q99700 1313 aaKnown RBP19.84■□□□□ 0.77
SPSB3-207ENST00000565550 ZBTB24O43167 697 aaPredicted RBP19.84■□□□□ 0.77
SPSB3-207ENST00000565550 KLKB1P03952 638 aa19.84■□□□□ 0.77
SPSB3-207ENST00000565550 ITPKAP23677 461 aa19.84■□□□□ 0.77
SPSB3-207ENST00000565550 RPL6Q02878 288 aaKnown RBP19.84■□□□□ 0.77
SPSB3-207ENST00000565550 LMAN2Q12907 356 aa19.84■□□□□ 0.77
SPSB3-207ENST00000565550 KIAA1211LQ6NV74 962 aa19.84■□□□□ 0.77
SPSB3-207ENST00000565550 SLC4A11Q8NBS3 891 aa19.84■□□□□ 0.77
SPSB3-207ENST00000565550 IPO4Q8TEX9 1081 aaKnown RBP19.84■□□□□ 0.77
SPSB3-207ENST00000565550 P2RY11Q96G91 374 aa19.84■□□□□ 0.77
SPSB3-207ENST00000565550 TMEM176AQ96HP8 235 aa19.84■□□□□ 0.77
SPSB3-207ENST00000565550 FAXDC2Q96IV6 333 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms