RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SGK1O00141 431 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 BAIAP3O94812 1187 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 ARPP19P56211 112 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 SCAPQ12770 1279 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 MTMR3Q13615 1198 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 ARL13BQ3SXY8 428 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 SPDYCQ5MJ68 293 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 TAS1R1Q7RTX1 841 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 RNF168Q8IYW5 571 aaPredicted RBP20.32■□□□□ 0.84
CLN6-205ENST00000564846 ATAD1Q8NBU5 361 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 CSPG4P5Q96PW8 444 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 FAM204AQ9H8W3 233 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 PCDH9Q9HC56 1237 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 MED4Q9NPJ6 270 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 FBXW11Q9UKB1 542 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 MTMR11A4FU01 709 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 PPFIA2O75334 1257 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 RBP3P10745 1247 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 ADRA1BP35368 520 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 WDR5P61964 334 aaKnown RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 DHX9Q08211 1270 aaKnown RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 DDR2Q16832 855 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 HSP90B2PQ58FF3 399 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 CFAP58Q5T655 872 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 ADAM32Q8TC27 787 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 RSAD2Q8WXG1 361 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 TSPYL1Q9H0U9 437 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 RC3H2Q9HBD1 1191 aaKnown RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 CWC15Q9P013 229 aaKnown RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 SCML2Q9UQR0 700 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 BACE2Q9Y5Z0 518 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 NDC80O14777 642 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 NR2C2P49116 596 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 DEFB103AP81534 67 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 IFRD2Q12894 506 aaPredicted RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 SPOUT1Q5T280 376 aaKnown RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 BTBD8Q5XKL5 378 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 KCNT2Q6UVM3 1135 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 NPNTQ6UXI9 565 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 RSPO2Q6UXX9 243 aaPredicted RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 CMTR2Q8IYT2 770 aaKnown RBP20.31■□□□□ 0.84
CLN6-205ENST00000564846 IQCKQ8N0W5 287 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 PIK3R5Q8WYR1 880 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 TXLNGYQ9BZA5 131 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 TMEM51Q9NW97 253 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.31■□□□□ 0.844e-9■■■■■ 31.6
CLN6-205ENST00000564846 MTRRQ9UBK8 725 aa20.31■□□□□ 0.84
CLN6-205ENST00000564846 COL4A6Q14031 1691 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 H3BRJ5 948 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 TP73O15350 636 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 STIP1P31948 543 aaKnown RBP20.3■□□□□ 0.84
CLN6-205ENST00000564846 CXCR3P49682 368 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 VPS41P49754 854 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 SLC8B1Q6J4K2 584 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 RHBDF2Q6PJF5 856 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 MON1AQ86VX9 555 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 ARHGAP18Q8N392 663 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 DQX1Q8TE96 717 aaKnown RBP20.3■□□□□ 0.84
CLN6-205ENST00000564846 ZNF558Q96NG5 402 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 IL37Q9NZH6 218 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 ANAPC5Q9UJX4 755 aa20.3■□□□□ 0.84
CLN6-205ENST00000564846 HSD17B3P37058 310 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 ITGA8P53708 1063 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 ROR1Q01973 937 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 BTG3Q14201 252 aaPredicted RBP20.29■□□□□ 0.84
CLN6-205ENST00000564846 SLMAPQ14BN4 828 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 P3H1Q32P28 736 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 C1orf228Q6PIY5 440 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 RNF19BQ6ZMZ0 732 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 SCD5Q86SK9 330 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 TAC4Q86UU9 113 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 PYROXD2Q8N2H3 581 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 FBXO22Q8NEZ5 403 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 RNF139Q8WU17 664 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 SPATA17Q96L03 361 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 RUFY1Q96T51 708 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 MAGEB5Q9BZ81 275 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 WDCPQ9H6R7 721 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 HEY1Q9Y5J3 304 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 CDY1Q9Y6F8 540 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 AGPSO00116 658 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 RTN3O95197 1032 aaPredicted RBP20.29■□□□□ 0.84
CLN6-205ENST00000564846 IFNB1P01574 187 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 IGLV3-25P01717 112 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 HAPLN1P10915 354 aaPredicted RBP20.29■□□□□ 0.84
CLN6-205ENST00000564846 GOT1P17174 413 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 LAG3P18627 525 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 GGCXP38435 758 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 GPR15P49685 360 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 ZNF135P52742 658 aaPredicted RBP20.29■□□□□ 0.84
CLN6-205ENST00000564846 MGAT5BQ3V5L5 792 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 IZUMO3Q5VZ72 239 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 KIAA1841Q6NSI8 718 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 DARS2Q6PI48 645 aaKnown RBP20.29■□□□□ 0.84
CLN6-205ENST00000564846 PRSS55Q6UWB4 352 aaPredicted RBP20.29■□□□□ 0.84
CLN6-205ENST00000564846 SLC39A11Q8N1S5 342 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 TTC9BQ8N6N2 239 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 GLIS1Q8NBF1 620 aa20.29■□□□□ 0.84
CLN6-205ENST00000564846 RIN2Q8WYP3 895 aaPredicted RBP20.29■□□□□ 0.84
CLN6-205ENST00000564846 VN1R3Q9BXE9 311 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms