RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 TBX21Q9UL17 535 aa26.19■■□□□ 1.78
LINC01003-201ENST00000564834 TBKBP1A7MCY6 615 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 RIPK2O43353 540 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 MYZAPP0CAP1 466 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 SLC5A3P53794 718 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 GYS2P54840 703 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 ZNF280DQ6N043 979 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 DARS2Q6PI48 645 aaKnown RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 PCGF5Q86SE9 256 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 ZC3H18Q86VM9 953 aaKnown RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 LRRC43Q8N309 656 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 ZCCHC9Q8N567 271 aaKnown RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 MAGEB5Q9BZ81 275 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 GPR62Q9BZJ7 368 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 WDR6Q9NNW5 1121 aaKnown RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 ABI2Q9NYB9 513 aaPredicted RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 HEY1Q9Y5J3 304 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 TNFRSF10BO14763 440 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 F9P00740 461 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 FGFR3P22607 806 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 NR2C2P49116 596 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 SCAPQ12770 1279 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 ELAVL2Q12926 359 aaKnown RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 TERF2Q15554 542 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 CTXN3Q4LDR2 81 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 EFHC2Q5JST6 749 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 RNASEH2BQ5TBB1 312 aaKnown RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 BSPRYQ5W0U4 402 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 FUT10Q6P4F1 479 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 VSTM1Q6UX27 236 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 CEP57Q86XR8 500 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 PYROXD2Q8N2H3 581 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 FAM71DQ8N9W8 422 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 CDC42EP4Q9H3Q1 356 aaKnown RBP26.18■■□□□ 1.78
LINC01003-201ENST00000564834 TMBIM4Q9HC24 238 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 HCSTQ9UBK5 93 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 SHOC2Q9UQ13 582 aa26.18■■□□□ 1.78
LINC01003-201ENST00000564834 CFAP69A5D8W1 941 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 OR6C75A6NL08 312 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 H7C0C1 242 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 GALTP07902 379 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 GOT1P17174 413 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 ATP5OP48047 213 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 IFFO1Q0D2I5 559 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 SLC29A2Q14542 456 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 RELL1Q8IUW5 271 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 SCAMP5Q8TAC9 235 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 DIS3LQ8TF46 1054 aaKnown RBP26.17■■□□□ 1.78
LINC01003-201ENST00000564834 DDIT4Q9NX09 232 aa26.17■■□□□ 1.78
LINC01003-201ENST00000564834 FAM76AQ8TAV0 307 aa26.16■■□□□ 1.78
LINC01003-201ENST00000564834 ADAM32Q8TC27 787 aa26.16■■□□□ 1.78
LINC01003-201ENST00000564834 RNF139Q8WU17 664 aa26.16■■□□□ 1.78
LINC01003-201ENST00000564834 EDEM1Q92611 657 aa26.16■■□□□ 1.78
LINC01003-201ENST00000564834 PLXNA3P51805 1871 aa26.16■■□□□ 1.78
LINC01003-201ENST00000564834 H3BRJ5 948 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 RPL22P35268 128 aaKnown RBP26.15■■□□□ 1.78
LINC01003-201ENST00000564834 ADRA1BP35368 520 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 CTCFP49711 727 aaPredicted RBP26.15■■□□□ 1.78
LINC01003-201ENST00000564834 CNKSR3Q6P9H4 555 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 ATP6V1G3Q96LB4 118 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 FBXW11Q9UKB1 542 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 ATP11BQ9Y2G3 1177 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 FARP1Q9Y4F1 1045 aaPredicted RBP26.15■■□□□ 1.78
LINC01003-201ENST00000564834 PCDHB5Q9Y5E4 795 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 BCLAF3A2AJT9 711 aaKnown RBP26.15■■□□□ 1.78
LINC01003-201ENST00000564834 HMGB1P1B2RPK0 211 aaPredicted RBP26.15■■□□□ 1.78
LINC01003-201ENST00000564834 TRIM66O15016 1216 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 XRCC4Q13426 336 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 IKBKEQ14164 716 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 NCBP2-AS2Q69YL0 99 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 FBXO46Q6PJ61 603 aaPredicted RBP26.15■■□□□ 1.78
LINC01003-201ENST00000564834 SCN4BQ8IWT1 228 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 RTP4Q96DX8 246 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 USP29Q9HBJ7 922 aa26.15■■□□□ 1.78
LINC01003-201ENST00000564834 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.15■■□□□ 1.78
LINC01003-201ENST00000564834 LTBP2Q14767 1821 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 MAGEA11P43364 429 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 ARL13BQ3SXY8 428 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 HOOK3Q86VS8 718 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 PPIL6Q8IXY8 311 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 ANKLE1Q8NAG6 615 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 EXOC4Q96A65 974 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 C8orf48Q96LL4 319 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 ARHGEF4Q9NR80 690 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 TMPRSS4Q9NRS4 437 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 ABCC13Q9NSE7 274 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 TMEM39AQ9NV64 488 aa26.14■■□□□ 1.78
LINC01003-201ENST00000564834 KIAA0100Q14667 2235 aaKnown RBP26.13■■□□□ 1.77
LINC01003-201ENST00000564834 SHBGP04278 402 aa26.13■■□□□ 1.77
LINC01003-201ENST00000564834 AMPD1P23109 780 aa26.13■■□□□ 1.77
LINC01003-201ENST00000564834 RFC2P35250 354 aa26.13■■□□□ 1.77
LINC01003-201ENST00000564834 YWHAGP61981 247 aaKnown RBP eCLIP26.13■■□□□ 1.77
LINC01003-201ENST00000564834 GBE1Q04446 702 aa26.13■■□□□ 1.77
LINC01003-201ENST00000564834 KRT71Q3SY84 523 aa26.13■■□□□ 1.77
LINC01003-201ENST00000564834 PRCCQ92733 491 aaPredicted RBP26.13■■□□□ 1.77
LINC01003-201ENST00000564834 RBM15Q96T37 977 aaKnown RBP eCLIP26.13■■□□□ 1.775e-7■■■■□ 23.6
LINC01003-201ENST00000564834 DNAJC17Q9NVM6 304 aaKnown RBP26.13■■□□□ 1.77
LINC01003-201ENST00000564834 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.12■■□□□ 1.77
LINC01003-201ENST00000564834 SMAPO00193 183 aa26.12■■□□□ 1.77
LINC01003-201ENST00000564834 TTC4O95801 387 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms