RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CXCR3P49682 368 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 PLTPP55058 493 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 EIF3EP60228 445 aaKnown RBP16.16■□□□□ 0.18
COMMD4-210ENST00000564587 WDR5P61964 334 aaKnown RBP16.16■□□□□ 0.18
COMMD4-210ENST00000564587 YWHAGP61981 247 aaKnown RBP eCLIP16.16■□□□□ 0.18
COMMD4-210ENST00000564587 DYNLT1P63172 113 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 XRCC4Q13426 336 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 PPIGQ13427 754 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■■■ 32.5
COMMD4-210ENST00000564587 TRADDQ15628 312 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 RAB6CQ53S08 254 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 PPP6R3Q5H9R7 873 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-210ENST00000564587 SLC8B1Q6J4K2 584 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 KCNT2Q6UVM3 1135 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 C4orf22Q6V702 233 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 PCGF5Q86SE9 256 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 FAM131BQ86XD5 332 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 RNF168Q8IYW5 571 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-210ENST00000564587 GOLGA6L1Q8N7Z2 621 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 RSAD2Q8WXG1 361 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 TMEM169Q96HH4 297 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 RUFY1Q96T51 708 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 RAB6CQ9H0N0 254 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 DDIT4Q9NX09 232 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 FBXW11Q9UKB1 542 aa16.16■□□□□ 0.18
COMMD4-210ENST00000564587 MTMR11A4FU01 709 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 GOLGA6BA6NDN3 693 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 NT5C1B-RDH14C9J2C7 533 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 OPA1O60313 960 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 SOD2P04179 222 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 FAM153BP0C7A2 387 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 HAPLN1P10915 354 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-210ENST00000564587 KLRC2P26717 231 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 HTR7P34969 479 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 PPM1AP35813 382 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 TUFMP49411 452 aaKnown RBP16.15■□□□□ 0.18
COMMD4-210ENST00000564587 MMRN1Q13201 1228 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 NME3Q13232 169 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 BTG3Q14201 252 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-210ENST00000564587 FAM153CQ494X1 144 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 BRMS1LQ5PSV4 323 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 RTP2Q5QGT7 225 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 OTUD1Q5VV17 481 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-210ENST00000564587 ZDHHC24Q6UX98 284 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 PDZD4Q76G19 769 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-210ENST00000564587 CCDC185Q8N715 623 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 PLD5Q8N7P1 536 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 FBXO22Q8NEZ5 403 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 PCDH19Q8TAB3 1148 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 RNF139Q8WU17 664 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 KCTD15Q96SI1 283 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-210ENST00000564587 HERC2P3Q9BVR0 1158 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 WDCPQ9H6R7 721 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 RC3H2Q9HBD1 1191 aaKnown RBP16.15■□□□□ 0.18
COMMD4-210ENST00000564587 GPATCH2LQ9NWQ4 482 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 MTMR10Q9NXD2 777 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.15■□□□□ 0.182e-7■■□□□ 14.4
COMMD4-210ENST00000564587 SPG21Q9NZD8 308 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 FAM153AQ9UHL3 310 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 ANAPC5Q9UJX4 755 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 MAFFQ9ULX9 164 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 RAD54BQ9Y620 910 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 HTTP42858 3142 aa16.15■□□□□ 0.18
COMMD4-210ENST00000564587 FAM92AA1XBS5 289 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 SGK1O00141 431 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 PPFIA2O75334 1257 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 RBP3P10745 1247 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 IVDP26440 423 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 ACTN2P35609 894 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 ROR1Q01973 937 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 MTA1Q13330 715 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 PSMD5Q16401 504 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 CA9Q16790 459 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 TPGS2Q68CL5 300 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 LRIG3Q6UXM1 1119 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 DENND5BQ6ZUT9 1274 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 TMC3Q7Z5M5 1100 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 CDKL3Q8IVW4 592 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-210ENST00000564587 SLC39A11Q8N1S5 342 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 SCAMP5Q8TAC9 235 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 FBXO25Q8TCJ0 367 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 DQX1Q8TE96 717 aaKnown RBP16.14■□□□□ 0.17
COMMD4-210ENST00000564587 GDAP1L1Q96MZ0 367 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 CSPG4P5Q96PW8 444 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 FERMT1Q9BQL6 677 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 ADAM33Q9BZ11 813 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 NEUROG2Q9H2A3 272 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 SMOC2Q9H3U7 446 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 WDR6Q9NNW5 1121 aaKnown RBP16.14■□□□□ 0.17
COMMD4-210ENST00000564587 OLA1Q9NTK5 396 aaKnown RBP16.14■□□□□ 0.17
COMMD4-210ENST00000564587 PIGVQ9NUD9 493 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 CLIC5Q9NZA1 410 aa16.14■□□□□ 0.17
COMMD4-210ENST00000564587 KIAA0100Q14667 2235 aaKnown RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 BCLAF3A2AJT9 711 aaKnown RBP16.13■□□□□ 0.17
COMMD4-210ENST00000564587 HACD1B0YJ81 288 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 IGLV3-25P01717 112 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 SLC2A3P11169 496 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 YWHAQP27348 245 aa16.13■□□□□ 0.17
COMMD4-210ENST00000564587 GLUD2P49448 558 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms