RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 DSG4Q86SJ6 1040 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 P2RY11Q96G91 374 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 SLITRK1Q96PX8 696 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 TTC12Q9H892 705 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 PREBQ9HCU5 417 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 SPHK2Q9NRA0 654 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 ABI2Q9NYB9 513 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 NLGN3Q9NZ94 848 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 CFAP97Q9P2B7 532 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 WRAP73Q9P2S5 460 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 HIVEP2P31629 2446 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 SMCO2A6NFE2 343 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 DDAH1O94760 285 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 OLFM2O95897 454 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 ALPPL2P10696 532 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 HGFP14210 728 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 FOSL1P15407 271 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 HNRNPUQ00839 825 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 ZNF177Q13360 481 aaPredicted RBP11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 IMMTQ16891 758 aaKnown RBP11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 ANO4Q32M45 955 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 SLC45A4Q5BKX6 768 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 SDHAF4Q5VUM1 108 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 TMEM25Q86YD3 366 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 WDR48Q8TAF3 677 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 SGPP1Q9BX95 441 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 UCKL1Q9NWZ5 548 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 FOXJ2Q9P0K8 574 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 CNTN3Q9P232 1028 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 THAP10Q9P2Z0 257 aaPredicted RBP11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 RPH3AQ9Y2J0 694 aaPredicted RBP11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 CPQQ9Y646 472 aa11.38□□□□□ -0.59
HDGFL3-204ENST00000563790 MKRN2OSH3BPM6 223 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 EDN1P05305 212 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 LIFP15018 202 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 KLK2P20151 261 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 ACO1P21399 889 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 ITGB7P26010 798 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 YWHABP31946 246 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 GRM5P41594 1212 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 ADAM9Q13443 819 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 INPP5JQ15735 1006 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 BMT2Q1RMZ1 405 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 XKR9Q5GH70 373 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 C20orf194Q5TEA3 1177 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 LRRTM3Q86VH5 581 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 DDX42Q86XP3 938 aaKnown RBP eCLIP11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 ZNF654Q8IZM8 581 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 CEP120Q8N960 986 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 MFSD2AQ8NA29 543 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 OR2T3Q8NH03 318 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 CENPTQ96BT3 561 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 MS4A3Q96HJ5 214 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 RNF38Q9H0F5 515 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 DLL4Q9NR61 685 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 SMPD4Q9NXE4 827 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 PISDQ9UG56 409 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 USP20Q9Y2K6 914 aa11.37□□□□□ -0.59
HDGFL3-204ENST00000563790 LRRIQ4A6NIV6 560 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 C10orf142B7Z368 130 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 ACKR2O00590 384 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 RIOK3O14730 519 aaKnown RBP11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 JMJD7P0C870 316 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 SSTR2P30874 369 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 KCNJ12Q14500 433 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 SAFBQ15424 915 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 GUSBP11Q6P575 273 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 DSTYKQ6XUX3 929 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 OTUD6AQ7L8S5 288 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 EFL1Q7Z2Z2 1120 aaKnown RBP11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 TICAM2Q86XR7 235 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 ADGRF2Q8IZF7 708 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 FAM174AQ8TBP5 190 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 GPBAR1Q8TDU6 330 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 CCDC94Q9BW85 323 aaPredicted RBP11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 EPB41L5Q9HCM4 733 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 KCND3Q9UK17 655 aa11.36□□□□□ -0.59
HDGFL3-204ENST00000563790 TMX2-CTNND1H3BSU7 103 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 CAPN5O15484 640 aaPredicted RBP11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 CBX6O95503 412 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 ODC1P11926 461 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 ATP1A2P50993 1020 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 MFAP1P55081 439 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 ZBTB16Q05516 673 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 CDC20Q12834 499 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 SPIDRQ14159 915 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 PRR30Q53SZ7 412 aaPredicted RBP11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 NUGGCQ68CJ6 796 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 B3GNT8Q7Z7M8 397 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 IQCHQ86VS3 1027 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 ZBTB8OSQ8IWT0 167 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 C4orf19Q8IY42 314 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms