RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 NDUFS2O75306 463 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 CER1O95813 267 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 FAM163BP0C2L3 166 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 CCDC130P13994 396 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 GNSP15586 552 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 GJB2P29033 226 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 EIF2S3P41091 472 aaKnown RBP10.95□□□□□ -0.66
SF3B3-204ENST00000563739 ORC1Q13415 861 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 ZNF234Q14588 700 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 SYCP2LQ5T4T6 812 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 LARP1BQ659C4 914 aaKnown RBP10.95□□□□□ -0.66
SF3B3-204ENST00000563739 ZC3H3Q8IXZ2 948 aaKnown RBP10.95□□□□□ -0.66
SF3B3-204ENST00000563739 OR6B3Q8NGW1 331 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 RHBDD1Q8TEB9 315 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 SORCS1Q8WY21 1168 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 BHMTQ93088 406 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 MMS19Q96T76 1030 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 HNRNPABQ99729 332 aaKnown RBP10.95□□□□□ -0.66
SF3B3-204ENST00000563739 MIR1-1HGQ9H1L0 117 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 TM9SF3Q9HD45 589 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 DMAP1Q9NPF5 467 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-204ENST00000563739 KRT82Q9NSB4 513 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 EHD2Q9NZN4 543 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 NUDT5Q9UKK9 219 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 EXOC7Q9UPT5 735 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 CLIC4Q9Y696 253 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 A8MXQ7 604 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 TK2O00142 265 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 STC2O76061 302 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 VNN1O95497 513 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 TNNC2P02585 160 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 ACSL1P33121 698 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 CTSKP43235 329 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 CYP24A1Q07973 514 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 C19orf57Q0VDD7 668 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 PSMD6Q15008 389 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 DUOXA2Q1HG44 320 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 WDR72Q3MJ13 1102 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 SCD5Q86SK9 330 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 TMPRSS6Q8IU80 811 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
SF3B3-204ENST00000563739 NOC3LQ8WTT2 800 aaKnown RBP10.94□□□□□ -0.66
SF3B3-204ENST00000563739 SCFD1Q8WVM8 642 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 DCBLD2Q96PD2 775 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 TWNKQ96RR1 684 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 CDC6Q99741 560 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 VRTNQ9H8Y1 702 aa10.94□□□□□ -0.66
SF3B3-204ENST00000563739 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.94□□□□□ -0.66
SF3B3-204ENST00000563739 UBR5O95071 2799 aaPredicted RBP10.94□□□□□ -0.66
SF3B3-204ENST00000563739 ANKRD17O75179 2603 aaKnown RBP10.93□□□□□ -0.66
SF3B3-204ENST00000563739 DOCK9Q9BZ29 2069 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 ZNF233A6NK53 670 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 TNFSF14O43557 240 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 PCDHGA12O60330 932 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 AP1G2O75843 785 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 WNT1P04628 370 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 HLA-EP13747 358 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 CASP4P49662 377 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 IL9RQ01113 521 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 EHHADHQ08426 723 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 GALNT15Q8N3T1 639 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 XPO6Q96QU8 1125 aaKnown RBP10.93□□□□□ -0.66
SF3B3-204ENST00000563739 SEMA4CQ9C0C4 833 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 EBF2Q9HAK2 575 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 OSGEPQ9NPF4 335 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 AGPAT3Q9NRZ7 376 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.93□□□□□ -0.66
SF3B3-204ENST00000563739 WDR35Q9P2L0 1181 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 ANKRD6Q9Y2G4 727 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 SPTA1P02549 2419 aa10.93□□□□□ -0.66
SF3B3-204ENST00000563739 PIEZO2Q9H5I5 2752 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 A0A1W2PQH9 124 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 E9PAM4 449 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 TULP1O00294 542 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-204ENST00000563739 IGHV4-34P06331 123 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 DLATP10515 647 aaKnown RBP10.92□□□□□ -0.66
SF3B3-204ENST00000563739 GRIA4P48058 902 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 ACADVLP49748 655 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 DNAJC3Q13217 504 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 CAMK2GQ13555 558 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-204ENST00000563739 ALCAMQ13740 583 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 SNRNP35Q16560 246 aaKnown RBP10.92□□□□□ -0.66
SF3B3-204ENST00000563739 PREPLQ4J6C6 727 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-204ENST00000563739 FAM173BQ6P4H8 233 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 IL27RAQ6UWB1 636 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 SCARA5Q6ZMJ2 495 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 CLEC20AQ6ZU45 233 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 KANSL1Q7Z3B3 1105 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 ACOT1Q86TX2 421 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 FAM124AQ86V42 546 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 FAM217AQ8IXS0 508 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 SYCP3Q8IZU3 236 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 ZNF366Q8N895 744 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 SNIP1Q8TAD8 396 aaKnown RBP10.92□□□□□ -0.66
SF3B3-204ENST00000563739 SLC2A14Q8TDB8 520 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 BIRC7Q96CA5 298 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 SIPA1Q96FS4 1042 aa10.92□□□□□ -0.66
SF3B3-204ENST00000563739 SMARCD1Q96GM5 515 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms