RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ROBO1Q9Y6N7 1651 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 DHX29Q7Z478 1369 aaKnown RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 DENND3A2RUS2 1198 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 ASNA1O43681 348 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 STRNO43815 780 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 TRPA1O75762 1119 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 TP53P04637 393 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 ZFYP08048 801 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 CKMT2P17540 419 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CPT2P23786 658 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 MNAT1P51948 309 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 VAMP2P63027 116 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 DLG4P78352 724 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ATP8B2P98198 1209 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PRKCEQ02156 737 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 EPS8Q12929 822 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 NPRL3Q12980 569 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 IL24Q13007 206 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 TYSND1Q2T9J0 566 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 GLRA4Q5JXX5 417 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PRAMEF14Q5SWL7 426 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 THOC7Q6I9Y2 204 aaKnown RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 TMEM53Q6P2H8 277 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 COMTD1Q86VU5 262 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 MICU3Q86XE3 530 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PALM2Q8IXS6 379 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 SEPT12Q8IYM1 358 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ZNF295-AS1Q8N0V1 137 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 EXOC6Q8TAG9 804 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 HASPINQ8TF76 798 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 KCNE4Q8WWG9 221 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 IP6K1Q92551 441 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 MRPS27Q92552 414 aaKnown RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 ART5Q96L15 291 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 GPR61Q9BZJ8 451 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CCDC86Q9H6F5 360 aaKnown RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 CYP26B1Q9NR63 512 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 FAM114A2Q9NRY5 505 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 OXSMQ9NWU1 459 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ZDHHC7Q9NXF8 308 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 STK32BQ9NY57 414 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CPNE7Q9UBL6 633 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CCL27Q9Y4X3 112 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PHLPP1O60346 1717 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PLEKHH2Q8IVE3 1493 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 TIAM1Q13009 1591 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 LOC100653049A0A140TA62 436 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 ERVH48-1M5A8F1 160 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 NFKBIEO00221 500 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 DNALI1O14645 258 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 TRDMT1O14717 391 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 MTX2O75431 263 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 SPAG6O75602 509 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 TSPAN9O75954 239 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 KRT34O76011 436 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 HTR3BO95264 441 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 CYC1P08574 325 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 ACPPP15309 386 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 EDNRBP24530 442 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 TBXAS1P24557 533 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 PSMC2P35998 433 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 GRM5P41594 1212 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 ARF5P84085 180 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 TDGQ13569 410 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 PUM1Q14671 1186 aaKnown RBP eCLIP4.97□□□□□ -1.61
SMG1-207ENST00000563235 USP10Q14694 798 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 NCF4Q15080 339 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 AANATQ16613 207 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 PCGF3Q3KNV8 242 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 ADCK5Q3MIX3 580 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 NHSL2Q5HYW2 709 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 CEP78Q5JTW2 689 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 KANK2Q63ZY3 851 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 CNKSR3Q6P9H4 555 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 DEGS2Q6QHC5 323 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 KDM7AQ6ZMT4 941 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 LEKR1Q6ZMV7 388 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 ZNF704Q6ZNC4 412 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 HTR3DQ70Z44 454 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 GPR142Q7Z601 462 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 SIRT2Q8IXJ6 389 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 DIS3L2Q8IYB7 885 aaKnown RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 ADSSL1Q8N142 457 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 WDTC1Q8N5D0 677 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 FAM71BQ8TC56 605 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 STAMQ92783 540 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 FOXJ1Q92949 421 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 C11orf24Q96F05 449 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 KCNJ15Q99712 375 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 NTN4Q9HB63 628 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 EHD2Q9NZN4 543 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 HMGXB4Q9UGU5 601 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 CORO1CQ9ULV4 474 aaPredicted RBP4.97□□□□□ -1.61
SMG1-207ENST00000563235 CFL2Q9Y281 166 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 SLC12A7Q9Y666 1083 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 SPATA31E1Q6ZUB1 1445 aa4.97□□□□□ -1.61
SMG1-207ENST00000563235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.97□□□□□ -1.61
SMG1-207ENST00000563235 TTC26A0AVF1 554 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms