RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 FXR1P51114 621 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMG1-206ENST00000562668 ZNF135P52742 658 aaPredicted RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 PSMC1P62191 440 aaKnown RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 SNAPC2Q13487 334 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 DLGAP5Q15398 846 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 FAM153CQ494X1 144 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 KHDC1Q4VXA5 237 aaKnown RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 FCRLBQ6BAA4 426 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 CDC42EP5Q6NZY7 148 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 KBTBD3Q8NAB2 608 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 SMG7Q92540 1137 aaKnown RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 DPF1Q92782 380 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 TEKT1Q969V4 418 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 HAPLN3Q96S86 360 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 OSBPL9Q96SU4 736 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 RIOK1Q9BRS2 568 aaKnown RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 CNPPD1Q9BV87 410 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 ALG8Q9BVK2 526 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 GLIS2Q9BZE0 524 aaPredicted RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 TDRD3Q9H7E2 651 aaKnown RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 GGA3Q9NZ52 723 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 RNF7Q9UBF6 113 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 ZNF70Q9UC06 446 aaPredicted RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 ABCF2Q9UG63 623 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 HDAC9Q9UKV0 1011 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 NR2E3Q9Y5X4 410 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 NAV1Q8NEY1 1877 aa5.4□□□□□ -1.55
SMG1-206ENST00000562668 THSD7BQ9C0I4 1608 aa5.4□□□□□ -1.55
SMG1-206ENST00000562668 COL2A1P02458 1487 aaPredicted RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 MYH1P12882 1939 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 CLRN2A0PK11 232 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 KATNA1O75449 491 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 MAP4K4O95819 1239 aaPredicted RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 TTLL1O95922 423 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 PRKCGP05129 697 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 GJB1P08034 283 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 CDK11BP21127 795 aaKnown RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 BTDP43251 543 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 CACNB3P54284 484 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 C1QTNF8P60827 252 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 DYNLL1P63167 89 aaKnown RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 EXOSC10Q01780 885 aaKnown RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 DSC2Q02487 901 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 TTF1Q15361 905 aaPredicted RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 RNF187Q5TA31 235 aaPredicted RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 FKBP1CQ5VVH2 108 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 CST9Q5W186 159 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 TMED8Q6PL24 325 aaPredicted RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 RASAL3Q86YV0 1011 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 CNTROBQ8N137 903 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 MAGEB6Q8N7X4 407 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 PSD4Q8NDX1 1056 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 C1QTNF7Q9BXJ2 289 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 IDI2Q9BXS1 227 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 TPSD1Q9BZJ3 242 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 GPR35Q9HC97 309 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 DDX4Q9NQI0 724 aaKnown RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 RAI14Q9P0K7 980 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 ST3GAL5Q9UNP4 418 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMG1-206ENST00000562668 ZNF532Q9HCE3 1301 aa5.39□□□□□ -1.55
SMG1-206ENST00000562668 RPAP1Q9BWH6 1393 aaPredicted RBP5.39□□□□□ -1.55
SMG1-206ENST00000562668 LRRC14BA6NHZ5 514 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 LINC01548A6NM66 108 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 F5H697 171 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 ERC2O15083 957 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 RNF113AO15541 343 aaKnown RBP5.38□□□□□ -1.55
SMG1-206ENST00000562668 TRIAP1O43715 76 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 IDH1O75874 414 aaKnown RBP5.38□□□□□ -1.55
SMG1-206ENST00000562668 SOAT2O75908 522 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 FTH1P19P0C7X4 201 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 RARBP10826 455 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 DRD4P21917 467 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 SMARCA1P28370 1054 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 PIK3CGP48736 1102 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 GSTO1P78417 241 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 TTC22Q5TAA0 569 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 SLC9C2Q5TAH2 1124 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 NAA16Q6N069 864 aaPredicted RBP5.38□□□□□ -1.55
SMG1-206ENST00000562668 SLC30A10Q6XR72 485 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 C1QL2Q7Z5L3 287 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 TICAM2Q86XR7 235 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 DZIP1Q86YF9 867 aaKnown RBP5.38□□□□□ -1.55
SMG1-206ENST00000562668 APOBEC3FQ8IUX4 373 aaKnown RBP5.38□□□□□ -1.55
SMG1-206ENST00000562668 CAMKK1Q8N5S9 505 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 RFKQ969G6 155 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 FKBP10Q96AY3 582 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 CDCA5Q96FF9 252 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 CCDC136Q96JN2 1154 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 SEC62Q99442 399 aaKnown RBP5.38□□□□□ -1.55
SMG1-206ENST00000562668 ACTRT3Q9BYD9 372 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 SLC13A1Q9BZW2 595 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 DEFB129Q9H1M3 183 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 IL25Q9H293 177 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 SMOC2Q9H3U7 446 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 PHIPQ8WWQ0 1821 aa5.38□□□□□ -1.55
SMG1-206ENST00000562668 BAZ2AQ9UIF9 1905 aaKnown RBP5.38□□□□□ -1.55
SMG1-206ENST00000562668 ATAD5Q96QE3 1844 aa5.37□□□□□ -1.55
SMG1-206ENST00000562668 GREB1LQ9C091 1923 aaPredicted RBP5.37□□□□□ -1.55
SMG1-206ENST00000562668 DDTLA6NHG4 134 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms