RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 GLIS1Q8NBF1 620 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 SHCBP1Q8NEM2 672 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 MZB1Q8WU39 189 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 ATP2A3Q93084 1043 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 ELMO3Q96BJ8 720 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 MIEF2Q96C03 454 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 STAMBPL1Q96FJ0 436 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 HPDLQ96IR7 371 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 SPATA33Q96N06 139 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 CPXM1Q96SM3 734 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 TBC1D10AQ9BXI6 508 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 WWP1Q9H0M0 922 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 CDT1Q9H211 546 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 RCOR3Q9P2K3 495 aaPredicted RBP7.77□□□□□ -1.17
CFDP1-202ENST00000562602 HESX1Q9UBX0 185 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
CFDP1-202ENST00000562602 GJA3Q9Y6H8 435 aa7.77□□□□□ -1.17
CFDP1-202ENST00000562602 A0A1W2PPM1 405 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 TCRBV9S1A1TA0A576 114 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 A6NJR5 290 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 LACTBL1A8MY62 500 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 F8W8V4 182 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 GOLGA8MH3BSY2 632 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 NFKBIEO00221 500 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 GYG2O15488 501 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 MAGEC1O60732 1142 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 DIAPH2O60879 1101 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 FAM163BP0C2L3 166 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ESRRAP11474 423 aaPredicted RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 MYL4P12829 197 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 TCF4P15884 667 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SSTR1P30872 391 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 FDFT1P37268 417 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 CCNFP41002 786 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ELK3P41970 407 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ETV4P43268 484 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 PTPN9P43378 593 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 DYNLT1P63172 113 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 MRPS35P82673 323 aaKnown RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SLC6A3Q01959 620 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SF3A3Q12874 501 aaKnown RBP eCLIP7.76□□□□□ -1.172e-7■■■■■ 49.4
CFDP1-202ENST00000562602 NAA25Q14CX7 972 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 PRKD1Q15139 912 aaPredicted RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 DNAL1Q4LDG9 190 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 TMEM259Q4ZIN3 620 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ANKRD20A2Q5SQ80 823 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ANKRD20A1Q5TYW2 823 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ANKRD22Q5VYY1 191 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SLC9A4Q6AI14 798 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 OR6B2Q6IFH4 312 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 EFCAB12Q6NXP0 572 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 KYAT3Q6YP21 454 aaKnown RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SCARA5Q6ZMJ2 495 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 FASTKD5Q7L8L6 764 aaKnown RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 TMEM110Q86TL2 294 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 MTDHQ86UE4 582 aaKnown RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ZNF410Q86VK4 478 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 UNC45BQ8IWX7 931 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 KIF2BQ8N4N8 673 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ARFGAP1Q8N6T3 406 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 PLD5Q8N7P1 536 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 C1orf127Q8N9H9 656 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 PPFIBP2Q8ND30 876 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 JOSD2Q8TAC2 188 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 GSDMBQ8TAX9 411 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 CCDC110Q8TBZ0 833 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SREK1Q8WXA9 508 aaKnown RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 RXFP2Q8WXD0 754 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 HSPH1Q92598 858 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 CDKL2Q92772 493 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 STMN2Q93045 179 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 MCUR1Q96AQ8 359 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 CNTNAP3BQ96NU0 1288 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ACAP3Q96P50 834 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 NUDCD1Q96RS6 583 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 CNTNAP3Q9BZ76 1288 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ELOVL4Q9GZR5 314 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SDCBP2Q9H190 292 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 GBA2Q9HCG7 927 aaPredicted RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 NPHS2Q9NP85 383 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SLC5A4Q9NY91 659 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 DNAJB4Q9UDY4 337 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 ZC3H7BQ9UGR2 993 aaKnown RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 PCSK1NQ9UHG2 260 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 SIX4Q9UIU6 781 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 GGT7Q9UJ14 662 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 HAO1Q9UJM8 370 aa7.76□□□□□ -1.17
CFDP1-202ENST00000562602 CORO1CQ9ULV4 474 aaPredicted RBP7.76□□□□□ -1.17
CFDP1-202ENST00000562602 MYH9P35579 1960 aaKnown RBP7.75□□□□□ -1.17
CFDP1-202ENST00000562602 A0A0G2JLL6 359 aaPredicted RBP7.75□□□□□ -1.17
CFDP1-202ENST00000562602 ZBTB42B2RXF5 422 aa7.75□□□□□ -1.17
CFDP1-202ENST00000562602 AP3B1O00203 1094 aa7.75□□□□□ -1.17
CFDP1-202ENST00000562602 XPOTO43592 962 aaKnown RBP7.75□□□□□ -1.17
CFDP1-202ENST00000562602 CSDE1O75534 798 aaKnown RBP7.75□□□□□ -1.17
CFDP1-202ENST00000562602 USP2O75604 605 aaPredicted RBP7.75□□□□□ -1.17
CFDP1-202ENST00000562602 CIB2O75838 187 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms