RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 IPO9Q96P70 1041 aaKnown RBP11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 ACOX2Q99424 681 aa11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 TPSD1Q9BZJ3 242 aa11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 THAP9Q9H5L6 903 aa11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 CNGB3Q9NQW8 809 aa11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 DNAJC17Q9NVM6 304 aaKnown RBP11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 NCDNQ9UBB6 729 aa11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 LSM7Q9UK45 103 aaKnown RBP11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 MMP17Q9ULZ9 603 aa11.61□□□□□ -0.55
LPCAT4-202ENST00000562404 CCDC163A0A0D9SF12 145 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 GTPBP10A4D1E9 387 aaKnown RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 TBC1D3BA6NDS4 549 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 AXIN1O15169 862 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 LETM1O95202 739 aaPredicted RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 PENKP01210 267 aaPredicted RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 ERCC5P28715 1186 aaPredicted RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 TNFRSF4P43489 277 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 MRPS21P82921 87 aaKnown RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 GOLGA8FQ08AF8 430 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 GOLGA8DPQ0D2H9 430 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 SPEM2Q0P670 501 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 STILQ15468 1287 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 TRIP4Q15650 581 aaPredicted RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 CRY1Q16526 586 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 MAN2A1Q16706 1144 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 TPD52L1Q16890 204 aaPredicted RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 EXOC3L4Q17RC7 722 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 C10orf76Q5T2E6 689 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 EGFLAMQ63HQ2 1017 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 RSRC2Q7L4I2 434 aaKnown RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 SCUBE3Q8IX30 993 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 FAM217AQ8IXS0 508 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 ARHGAP18Q8N392 663 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 WDTC1Q8N5D0 677 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 FRMD1Q8N878 549 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 MDGA1Q8NFP4 955 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 GAB3Q8WWW8 586 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 SHC3Q92529 594 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 ACDQ96AP0 544 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 ERLEC1Q96DZ1 483 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 PIWIL1Q96J94 861 aaKnown RBP11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 MIS12Q9H081 205 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 DEC1Q9P2X7 70 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 APEX2Q9UBZ4 518 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 FBXO10Q9UK96 956 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 INVSQ9Y283 1065 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 GON4LQ3T8J9 2241 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 LAMA1P25391 3075 aa11.6□□□□□ -0.55
LPCAT4-202ENST00000562404 MUC22E2RYF6 1773 aaPredicted RBP11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 CKAP5Q14008 2032 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 GFRA2O00451 464 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 THAP12O43422 761 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 RPP40O75818 363 aaKnown RBP11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 APBB3O95704 486 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 LTFP02788 710 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 GNA15P30679 374 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 CNR2P34972 360 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 USP8P40818 1118 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 WASP42768 502 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 SGSHP51688 502 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 DGKEP52429 567 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 MFAP3P55082 362 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 CCDC6Q16204 474 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 VWA3BQ502W6 1294 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 LAIR1Q6GTX8 287 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 GRAMD4Q6IC98 578 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 ANO7Q6IWH7 933 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 MSANTD2Q6P1R3 559 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 C11orf57Q6ZUT1 292 aaPredicted RBP11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 TADA2BQ86TJ2 420 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 RASSF3Q86WH2 238 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 ZNF513Q8N8E2 541 aaPredicted RBP11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 RMDN1Q96DB5 314 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 HSFY1Q96LI6 401 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 CDK5RAP1Q96SZ6 601 aaKnown RBP11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 NDST4Q9H3R1 872 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 CD248Q9HCU0 757 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 ABCC13Q9NSE7 274 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 EBF1Q9UH73 591 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 DNAJC12Q9UKB3 198 aa11.59□□□□□ -0.55
LPCAT4-202ENST00000562404 A0A1W2PQF6 199 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 WASH3PC4AMC7 463 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 E5RJQ4 531 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 FOXN3O00409 490 aaPredicted RBP11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 PAPSS1O43252 624 aaPredicted RBP11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 TSPAN3O60637 253 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 IGLV3-27P01718 113 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 PRKCSHP14314 528 aaPredicted RBP11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 BCKDHBP21953 392 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 CLCN1P35523 988 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 DGKGP49619 791 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 PITX1P78337 314 aaPredicted RBP11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 KCNJ12Q14500 433 aa11.58□□□□□ -0.56
LPCAT4-202ENST00000562404 TAF5Q15542 800 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms