RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 APEX2Q9UBZ4 518 aa18.65■□□□□ 0.58
CMTM3-204ENST00000562357 CNTN6Q9UQ52 1028 aa18.65■□□□□ 0.58
CMTM3-204ENST00000562357 HBS1LQ9Y450 684 aaKnown RBP18.65■□□□□ 0.58
CMTM3-204ENST00000562357 YJEFN3A6XGL0 299 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 E7ENQ6 273 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-204ENST00000562357 SDHBP21912 280 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 GNA15P30679 374 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 ACADSBP45954 432 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 DGKGP49619 791 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 ARHGAP44Q17R89 818 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 USP39Q53GS9 565 aaKnown RBP18.64■□□□□ 0.57
CMTM3-204ENST00000562357 CT47A1Q5JQC4 288 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-204ENST00000562357 PMF1Q6P1K2 205 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 DENND1CQ8IV53 801 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 FMNL3Q8IVF7 1028 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 IL17RCQ8NAC3 791 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 LOXL4Q96JB6 756 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 TRIM62Q9BVG3 475 aa18.64■□□□□ 0.57
CMTM3-204ENST00000562357 BCCIPQ9P287 314 aaKnown RBP eCLIP18.64■□□□□ 0.57
CMTM3-204ENST00000562357 ATG2BQ96BY7 2078 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 PIK3R2O00459 728 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 PES1O00541 588 aaKnown RBP18.63■□□□□ 0.57
CMTM3-204ENST00000562357 THAP12O43422 761 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 FOXD2O60548 495 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-204ENST00000562357 LETM1O95202 739 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-204ENST00000562357 KLKB1P03952 638 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 HOXC13P31276 330 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 GBP1P32455 592 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 KIR2DL1P43626 348 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-204ENST00000562357 ZNF445P59923 1031 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 SPEM2Q0P670 501 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 MESP2Q0VG99 397 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 MEA1Q16626 185 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 BHLHA9Q7RTU4 235 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 PHTF2Q8N3S3 785 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 ZSWIM1Q9BR11 485 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 MIS12Q9H081 205 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 LMBRD1Q9NUN5 540 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 PLK2Q9NYY3 685 aa18.63■□□□□ 0.57
CMTM3-204ENST00000562357 AGO1Q9UL18 857 aaKnown RBP18.63■□□□□ 0.57
CMTM3-204ENST00000562357 PRR5-ARHGAP8B1AHC4 643 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 SGK1O00141 431 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 RHOBTB1O94844 696 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 LTFP02788 710 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 SLC9A1P19634 815 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 ARHGAP8P85298 464 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 E2F5Q15329 346 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 EMC10Q5UCC4 262 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 SMYD5Q6GMV2 418 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 IRF2BP1Q8IU81 584 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 SFTPA1Q8IWL2 248 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 CHPFQ8IZ52 775 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 PGBD3Q8N328 593 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 CPXM2Q8N436 756 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 SPACA7Q96KW9 195 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 MED15Q96RN5 788 aa18.62■□□□□ 0.57
CMTM3-204ENST00000562357 LATS1O95835 1130 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 PENKP01210 267 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-204ENST00000562357 CALCAP01258 141 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 TPM2P07951 284 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 PON1P27169 355 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 NTSR1P30989 418 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 BYSLQ13895 437 aaKnown RBP18.61■□□□□ 0.57
CMTM3-204ENST00000562357 TRIP4Q15650 581 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-204ENST00000562357 VWA3BQ502W6 1294 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 MSANTD2Q6P1R3 559 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 GJB7Q6PEY0 223 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 KBTBD6Q86V97 674 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 RASSF3Q86WH2 238 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 DDI1Q8WTU0 396 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 STK32AQ8WU08 396 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 ZNF606Q8WXB4 792 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 FAM149B1Q96BN6 582 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 TUBGCP2Q9BSJ2 902 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 TPSD1Q9BZJ3 242 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 SFMBT1Q9UHJ3 866 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 CDV3Q9UKY7 258 aaKnown RBP18.61■□□□□ 0.57
CMTM3-204ENST00000562357 STARD13Q9Y3M8 1113 aa18.61■□□□□ 0.57
CMTM3-204ENST00000562357 CFAP54Q96N23 3096 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 TCRBV21S2A2A0A5A6 115 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 CAPN9O14815 690 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 TRIM24O15164 1050 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 NCAM1P13591 858 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 HOXB2P14652 356 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 GPD2P43304 727 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 PTK2Q05397 1052 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 PUM1Q14671 1186 aaKnown RBP eCLIP18.6■□□□□ 0.57
CMTM3-204ENST00000562357 NUGGCQ68CJ6 796 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 DENND1BQ6P3S1 775 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 TMEM92Q6UXU6 159 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 UNC45BQ8IWX7 931 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 MDGA1Q8NFP4 955 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 UCMAQ8WVF2 138 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 ZC3H10Q96K80 434 aaKnown RBP18.6■□□□□ 0.57
CMTM3-204ENST00000562357 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 ZDHHC4Q9NPG8 344 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 SEMA4GQ9NTN9 838 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 CEP83Q9Y592 693 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms